RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CASZ1Q86V15 1759 aa10.79□□□□□ -0.68
ATXN3-219ENST00000553488 LRRC37A3O60309 1634 aa10.78□□□□□ -0.68
ATXN3-219ENST00000553488 TRIM37O94972 964 aa10.78□□□□□ -0.68
ATXN3-219ENST00000553488 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
ATXN3-219ENST00000553488 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
ATXN3-219ENST00000553488 POLR3AO14802 1390 aaPredicted RBP10.77□□□□□ -0.68
ATXN3-219ENST00000553488 CHRNA2Q15822 529 aa10.77□□□□□ -0.69
ATXN3-219ENST00000553488 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.69
ATXN3-219ENST00000553488 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
ATXN3-219ENST00000553488 OSBPP22059 807 aa10.76□□□□□ -0.69
ATXN3-219ENST00000553488 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
ATXN3-219ENST00000553488 BARGINQ6ZT62 677 aa10.76□□□□□ -0.69
ATXN3-219ENST00000553488 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
ATXN3-219ENST00000553488 CPDO75976 1380 aa10.76□□□□□ -0.69
ATXN3-219ENST00000553488 COL9A1P20849 921 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 STRN4Q9NRL3 753 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 VPS9D1Q9Y2B5 631 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 USP19O94966 1318 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 COL18A1P39060 1754 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 AKAP12Q02952 1782 aa10.75□□□□□ -0.69
ATXN3-219ENST00000553488 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-219ENST00000553488 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
ATXN3-219ENST00000553488 APBA3O96018 575 aa10.74□□□□□ -0.69
ATXN3-219ENST00000553488 NBR1Q14596 966 aa10.74□□□□□ -0.69
ATXN3-219ENST00000553488 NUDT16Q96DE0 195 aaKnown RBP10.74□□□□□ -0.69
ATXN3-219ENST00000553488 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-219ENST00000553488 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
ATXN3-219ENST00000553488 SLIT3O75094 1523 aa10.73□□□□□ -0.69
ATXN3-219ENST00000553488 MYOM1P52179 1685 aa10.73□□□□□ -0.69
ATXN3-219ENST00000553488 GRXCR2A6NFK2 248 aa10.72□□□□□ -0.69
ATXN3-219ENST00000553488 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-219ENST00000553488 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
ATXN3-219ENST00000553488 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
ATXN3-219ENST00000553488 NINLQ9Y2I6 1382 aa10.72□□□□□ -0.69
ATXN3-219ENST00000553488 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
ATXN3-219ENST00000553488 OVOS2A0A0G2JMS6 1433 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 ACEP12821 1306 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 GOLGB1Q14789 3259 aaKnown RBP10.71□□□□□ -0.69
ATXN3-219ENST00000553488 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 DCAF11Q8TEB1 546 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 RGPD5Q99666 1765 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
ATXN3-219ENST00000553488 CRB1P82279 1406 aa10.7□□□□□ -0.7
ATXN3-219ENST00000553488 PLEKHG3A1L390 1219 aa10.7□□□□□ -0.7
ATXN3-219ENST00000553488 YY1P25490 414 aa10.7□□□□□ -0.7
ATXN3-219ENST00000553488 TSR1Q2NL82 804 aaKnown RBP10.7□□□□□ -0.7
ATXN3-219ENST00000553488 CHD4Q14839 1912 aa10.69□□□□□ -0.7
ATXN3-219ENST00000553488 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
ATXN3-219ENST00000553488 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
ATXN3-219ENST00000553488 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
ATXN3-219ENST00000553488 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
ATXN3-219ENST00000553488 THRAP3Q9Y2W1 955 aaKnown RBP10.69□□□□□ -0.7
ATXN3-219ENST00000553488 SEMA3EO15041 775 aa10.68□□□□□ -0.7
ATXN3-219ENST00000553488 NBPF14Q5TI25 921 aa10.68□□□□□ -0.7
ATXN3-219ENST00000553488 SPON1Q9HCB6 807 aa10.68□□□□□ -0.7
ATXN3-219ENST00000553488 BCL9O00512 1426 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 MAP3K7O43318 606 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 KCNQ2O43526 872 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 EVA1CP58658 441 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 USP6P35125 1406 aa10.67□□□□□ -0.7
ATXN3-219ENST00000553488 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 PAPPAQ13219 1627 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-219ENST00000553488 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
ATXN3-219ENST00000553488 BRD4O60885 1362 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-219ENST00000553488 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-219ENST00000553488 C11orf95C9JLR9 678 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-219ENST00000553488 GCP02774 474 aa10.65□□□□□ -0.7
ATXN3-219ENST00000553488 PTF1AQ7RTS3 328 aa10.65□□□□□ -0.7
ATXN3-219ENST00000553488 CEP350Q5VT06 3117 aa10.65□□□□□ -0.7
ATXN3-219ENST00000553488 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
ATXN3-219ENST00000553488 PLSCR1O15162 318 aa10.64□□□□□ -0.71
ATXN3-219ENST00000553488 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
ATXN3-219ENST00000553488 PDGFDQ9GZP0 370 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-219ENST00000553488 NPDC1Q9NQX5 325 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-219ENST00000553488 PPP1R1BQ9UD71 204 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-219ENST00000553488 CPSF1Q10570 1443 aaKnown RBP10.64□□□□□ -0.71
ATXN3-219ENST00000553488 NFAT5O94916 1531 aa10.63□□□□□ -0.71
ATXN3-219ENST00000553488 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
ATXN3-219ENST00000553488 RABGEF1Q9UJ41 708 aa10.63□□□□□ -0.71
ATXN3-219ENST00000553488 ABCC6O95255 1503 aa10.63□□□□□ -0.71
ATXN3-219ENST00000553488 COL24A1Q17RW2 1714 aa10.62□□□□□ -0.71
ATXN3-219ENST00000553488 MON2Q7Z3U7 1717 aa10.62□□□□□ -0.71
ATXN3-219ENST00000553488 QSER1Q2KHR3 1735 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 WDR17Q8IZU2 1322 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 BTAF1O14981 1849 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 DDB1Q16531 1140 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-219ENST00000553488 TUBGCP6Q96RT7 1819 aa10.61□□□□□ -0.71
ATXN3-219ENST00000553488 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms