RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.51
GNE-206ENST00000543356 TEFQ10587 303 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 MPRIPQ6WCQ1 1025 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 WNK3Q9BYP7 1800 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 PHKG2P15735 406 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 TOM1L2Q6ZVM7 507 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 CENPQQ7L2Z9 268 aaPredicted RBP11.89□□□□□ -0.51
GNE-206ENST00000543356 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
GNE-206ENST00000543356 ABCC4O15439 1325 aa11.89□□□□□ -0.51
GNE-206ENST00000543356 API5Q9BZZ5 524 aaKnown RBP11.88□□□□□ -0.51
GNE-206ENST00000543356 NRAPQ86VF7 1730 aa11.88□□□□□ -0.51
GNE-206ENST00000543356 CACNA1FO60840 1977 aa11.88□□□□□ -0.51
GNE-206ENST00000543356 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
GNE-206ENST00000543356 HOXB7P09629 217 aa11.87□□□□□ -0.51
GNE-206ENST00000543356 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
GNE-206ENST00000543356 PTPRCP08575 1304 aa11.87□□□□□ -0.51
GNE-206ENST00000543356 RGS12O14924 1447 aa11.87□□□□□ -0.51
GNE-206ENST00000543356 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
GNE-206ENST00000543356 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
GNE-206ENST00000543356 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
GNE-206ENST00000543356 EVA1CP58658 441 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
GNE-206ENST00000543356 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
GNE-206ENST00000543356 NWD2Q9ULI1 1742 aa11.86□□□□□ -0.51
GNE-206ENST00000543356 IL2RBP14784 551 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 DEKP35659 375 aaKnown RBP11.85□□□□□ -0.51
GNE-206ENST00000543356 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 CHMP4BQ9H444 224 aaKnown RBP11.85□□□□□ -0.51
GNE-206ENST00000543356 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 CYP27B1O15528 508 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 STRN4Q9NRL3 753 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
GNE-206ENST00000543356 STK31Q9BXU1 1019 aa11.84□□□□□ -0.51
GNE-206ENST00000543356 DISP2A7MBM2 1401 aa11.84□□□□□ -0.51
GNE-206ENST00000543356 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
GNE-206ENST00000543356 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
GNE-206ENST00000543356 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
GNE-206ENST00000543356 UBAP1LF5GYI3 381 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
GNE-206ENST00000543356 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
GNE-206ENST00000543356 C5P01031 1676 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 KCNQ3O43525 872 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
GNE-206ENST00000543356 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 GLI3P10071 1580 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
GNE-206ENST00000543356 IGHDP01880 384 aa11.81□□□□□ -0.52
GNE-206ENST00000543356 ZBTB7BO15156 539 aaPredicted RBP11.81□□□□□ -0.52
GNE-206ENST00000543356 LRP6O75581 1613 aa11.81□□□□□ -0.52
GNE-206ENST00000543356 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
GNE-206ENST00000543356 SLIT2O94813 1529 aa11.8□□□□□ -0.52
GNE-206ENST00000543356 JCADQ9P266 1359 aa11.8□□□□□ -0.52
GNE-206ENST00000543356 HDAC1Q13547 482 aaPredicted RBP11.8□□□□□ -0.52
GNE-206ENST00000543356 G2E3Q7L622 706 aa11.8□□□□□ -0.52
GNE-206ENST00000543356 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
GNE-206ENST00000543356 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
GNE-206ENST00000543356 FLIIQ13045 1269 aa11.79□□□□□ -0.52
GNE-206ENST00000543356 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
GNE-206ENST00000543356 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
GNE-206ENST00000543356 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
GNE-206ENST00000543356 CABP4P57796 275 aa11.78□□□□□ -0.52
GNE-206ENST00000543356 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
GNE-206ENST00000543356 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
GNE-206ENST00000543356 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
GNE-206ENST00000543356 ADAMTS2O95450 1211 aa11.77□□□□□ -0.52
GNE-206ENST00000543356 NECTIN2Q92692 538 aa11.77□□□□□ -0.52
GNE-206ENST00000543356 PKNOX2Q96KN3 472 aa11.77□□□□□ -0.52
GNE-206ENST00000543356 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
GNE-206ENST00000543356 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.53
GNE-206ENST00000543356 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
GNE-206ENST00000543356 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
GNE-206ENST00000543356 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
GNE-206ENST00000543356 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
GNE-206ENST00000543356 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
GNE-206ENST00000543356 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
GNE-206ENST00000543356 TTC5Q8N0Z6 440 aa11.76□□□□□ -0.53
GNE-206ENST00000543356 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
GNE-206ENST00000543356 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
GNE-206ENST00000543356 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
GNE-206ENST00000543356 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
GNE-206ENST00000543356 ITGB4P16144 1822 aa11.75□□□□□ -0.53
GNE-206ENST00000543356 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
GNE-206ENST00000543356 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
GNE-206ENST00000543356 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
GNE-206ENST00000543356 DDX54Q8TDD1 881 aaKnown RBP11.75□□□□□ -0.53
GNE-206ENST00000543356 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
GNE-206ENST00000543356 ATP10DQ9P241 1426 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms