RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 KIAA0586Q9BVV6 1533 aa9.36□□□□□ -0.91
PACRG-207ENST00000542936 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
PACRG-207ENST00000542936 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
PACRG-207ENST00000542936 FAM181BA6NEQ2 426 aa9.36□□□□□ -0.91
PACRG-207ENST00000542936 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
PACRG-207ENST00000542936 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
PACRG-207ENST00000542936 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
PACRG-207ENST00000542936 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
PACRG-207ENST00000542936 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
PACRG-207ENST00000542936 ROCK1Q13464 1354 aa9.35□□□□□ -0.91
PACRG-207ENST00000542936 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 ABCC5O15440 1437 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
PACRG-207ENST00000542936 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 DISP1Q96F81 1524 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 KDM6BO15054 1643 aa9.34□□□□□ -0.91
PACRG-207ENST00000542936 DAPK1P53355 1430 aa9.33□□□□□ -0.92
PACRG-207ENST00000542936 ZBBXA8MT70 800 aa9.33□□□□□ -0.92
PACRG-207ENST00000542936 MAN1A2O60476 641 aa9.33□□□□□ -0.92
PACRG-207ENST00000542936 FBXO45P0C2W1 286 aa9.33□□□□□ -0.92
PACRG-207ENST00000542936 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
PACRG-207ENST00000542936 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
PACRG-207ENST00000542936 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
PACRG-207ENST00000542936 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
PACRG-207ENST00000542936 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
PACRG-207ENST00000542936 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
PACRG-207ENST00000542936 NEFLP07196 543 aa9.32□□□□□ -0.92
PACRG-207ENST00000542936 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
PACRG-207ENST00000542936 ANKRD30BQ9BXX2 1392 aa9.32□□□□□ -0.92
PACRG-207ENST00000542936 NUP153P49790 1475 aaKnown RBP9.32□□□□□ -0.92
PACRG-207ENST00000542936 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
PACRG-207ENST00000542936 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
PACRG-207ENST00000542936 RELBQ01201 579 aa9.31□□□□□ -0.92
PACRG-207ENST00000542936 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
PACRG-207ENST00000542936 KIAA0556O60303 1618 aa9.31□□□□□ -0.92
PACRG-207ENST00000542936 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
PACRG-207ENST00000542936 FIGNL2A6NMB9 653 aa9.3□□□□□ -0.92
PACRG-207ENST00000542936 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
PACRG-207ENST00000542936 NDUFB9Q9Y6M9 179 aa9.3□□□□□ -0.92
PACRG-207ENST00000542936 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
PACRG-207ENST00000542936 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
PACRG-207ENST00000542936 TROQ12816 1431 aaPredicted RBP9.29□□□□□ -0.92
PACRG-207ENST00000542936 PRG4Q92954 1404 aaPredicted RBP9.29□□□□□ -0.92
PACRG-207ENST00000542936 SOS2Q07890 1332 aaPredicted RBP9.29□□□□□ -0.92
PACRG-207ENST00000542936 Q6ZVU0 165 aa9.28□□□□□ -0.92
PACRG-207ENST00000542936 CHMP7Q8WUX9 453 aaPredicted RBP9.28□□□□□ -0.92
PACRG-207ENST00000542936 ZNF395Q9H8N7 513 aaPredicted RBP9.28□□□□□ -0.92
PACRG-207ENST00000542936 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
PACRG-207ENST00000542936 DNMT3LQ9UJW3 386 aa9.28□□□□□ -0.92
PACRG-207ENST00000542936 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.92
PACRG-207ENST00000542936 CCDC7Q96M83 1385 aa9.27□□□□□ -0.93
PACRG-207ENST00000542936 GPR37L1O60883 481 aa9.27□□□□□ -0.93
PACRG-207ENST00000542936 NR1H3Q13133 447 aa9.27□□□□□ -0.93
PACRG-207ENST00000542936 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
PACRG-207ENST00000542936 CNTLNQ9NXG0 1405 aa9.27□□□□□ -0.93
PACRG-207ENST00000542936 RPRD2Q5VT52 1461 aaKnown RBP9.27□□□□□ -0.93
PACRG-207ENST00000542936 NCOA1Q15788 1441 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 ESPNB1AK53 854 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 APBB1O00213 710 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 VSIG8P0DPA2 414 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 HNRNPUQ00839 825 aaKnown RBP eCLIP9.26□□□□□ -0.93
PACRG-207ENST00000542936 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
PACRG-207ENST00000542936 DNMT1P26358 1616 aaKnown RBP9.26□□□□□ -0.93
PACRG-207ENST00000542936 ADD1P35611 737 aaKnown RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 PZPP20742 1482 aa9.25□□□□□ -0.93
PACRG-207ENST00000542936 MAGI1Q96QZ7 1491 aaPredicted RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
PACRG-207ENST00000542936 SYNJ2O15056 1496 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 ERCC6Q03468 1493 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 PLB1Q6P1J6 1458 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 SPINT1O43278 529 aa9.24□□□□□ -0.93
PACRG-207ENST00000542936 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
PACRG-207ENST00000542936 EIF4G3O43432 1585 aaKnown RBP9.24□□□□□ -0.93
PACRG-207ENST00000542936 CARMIL2Q6F5E8 1435 aa9.23□□□□□ -0.93
PACRG-207ENST00000542936 LILRA1O75019 489 aa9.23□□□□□ -0.93
PACRG-207ENST00000542936 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
PACRG-207ENST00000542936 ADH1AP07327 375 aa9.23□□□□□ -0.93
PACRG-207ENST00000542936 CCDC184Q52MB2 194 aa9.23□□□□□ -0.93
PACRG-207ENST00000542936 ZNF330Q9Y3S2 320 aaPredicted RBP9.23□□□□□ -0.93
PACRG-207ENST00000542936 NUP160Q12769 1436 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.22□□□□□ -0.93
PACRG-207ENST00000542936 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
PACRG-207ENST00000542936 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 ANKRD30AQ9BXX3 1397 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 KIAA1107Q9UPP5 1409 aa9.22□□□□□ -0.93
PACRG-207ENST00000542936 ADGRL2O95490 1459 aa9.21□□□□□ -0.93
PACRG-207ENST00000542936 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.94
PACRG-207ENST00000542936 SOCS7O14512 581 aa9.2□□□□□ -0.94
PACRG-207ENST00000542936 PCDHB11Q9Y5F2 797 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms