RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RIMBP3Q9UFD9 1639 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 DDX11L8A8MPP1 907 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 CENPBP07199 599 aaPredicted RBP7.42□□□□□ -1.22
DDB1-219ENST00000541513 ARID5AQ03989 594 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 DPYDQ12882 1025 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 CCAR1Q8IX12 1150 aaKnown RBP7.42□□□□□ -1.22
DDB1-219ENST00000541513 RPUSD2Q8IZ73 545 aaKnown RBP7.42□□□□□ -1.22
DDB1-219ENST00000541513 PMM1Q92871 262 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 TMX1Q9H3N1 280 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 ARHGEF11O15085 1522 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 UGGT2Q9NYU1 1516 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 CREB3O43889 395 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
DDB1-219ENST00000541513 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
DDB1-219ENST00000541513 ZNF76P36508 570 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 FKBP4Q02790 459 aaKnown RBP eCLIP7.41□□□□□ -1.22
DDB1-219ENST00000541513 NR6A1Q15406 480 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 NFE2L2Q16236 605 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 DEPDC4Q8N2C3 294 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 EYA1Q99502 592 aa7.41□□□□□ -1.22
DDB1-219ENST00000541513 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.41□□□□□ -1.22
DDB1-219ENST00000541513 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
DDB1-219ENST00000541513 NCOA4Q13772 614 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 POTEEQ6S8J3 1075 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 JPH4Q96JJ6 628 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 ANO2Q9NQ90 1003 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 TERF2IPQ9NYB0 399 aa7.4□□□□□ -1.22
DDB1-219ENST00000541513 TREHO43280 583 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 SLC34A2O95436 690 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 TNNI2P48788 182 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 PRSS12P56730 875 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 DAB2P98082 770 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 XPCQ01831 940 aaPredicted RBP7.39□□□□□ -1.23
DDB1-219ENST00000541513 SGSM3Q96HU1 749 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 MRS2Q9HD23 443 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 HCSTQ9UBK5 93 aa7.39□□□□□ -1.23
DDB1-219ENST00000541513 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
DDB1-219ENST00000541513 ERCC6L2Q5T890 1561 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 PRG4Q92954 1404 aaPredicted RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 ZBBXA8MT70 800 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 SORBS3O60504 671 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 DKK1O94907 266 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 C6orf132Q5T0Z8 1188 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 FILIP1Q7Z7B0 1213 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 PCGF6Q9BYE7 350 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 TYW1Q9NV66 732 aaKnown RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 DDX56Q9NY93 547 aaKnown RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 PRKAB1Q9Y478 270 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
DDB1-219ENST00000541513 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
DDB1-219ENST00000541513 SAMD9Q5K651 1589 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 DISP1Q96F81 1524 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 CARMIL2Q6F5E8 1435 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 PRMT3O60678 531 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 DNAJC6O75061 913 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
DDB1-219ENST00000541513 DNAJB2P25686 324 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 TBX4P57082 545 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 SIX5Q8N196 739 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 NME8Q8N427 588 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 OGFOD1Q8N543 542 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 KHSRPQ92945 711 aaKnown RBP eCLIP7.37□□□□□ -1.23
DDB1-219ENST00000541513 SPOCK3Q9BQ16 436 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 GEMIN8Q9NWZ8 242 aaKnown RBP7.37□□□□□ -1.23
DDB1-219ENST00000541513 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
DDB1-219ENST00000541513 ARAP1Q96P48 1450 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 STK10O94804 968 aaKnown RBP7.36□□□□□ -1.23
DDB1-219ENST00000541513 FGRP09769 529 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 NPR3P17342 541 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 ATP1A2P50993 1020 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 APLP1P51693 650 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 C4orf46Q504U0 113 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 NBPF6Q5VWK0 638 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 TRIM50Q86XT4 487 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
DDB1-219ENST00000541513 MCF2L2Q86YR7 1114 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 STAG1Q8WVM7 1258 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 TSC1Q92574 1164 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 MKL1Q969V6 931 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 MRFAP1L1Q96HT8 127 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 NBPF4Q96M43 638 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 SPC25Q9HBM1 224 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 GABBR1Q9UBS5 961 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
DDB1-219ENST00000541513 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
DDB1-219ENST00000541513 S100BP04271 92 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms