RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 RNF225M0QZC1 329 aaPredicted RBP8.82□□□□□ -1
CLNS1A-212ENST00000533957 WDR44Q5JSH3 913 aa8.82□□□□□ -1
CLNS1A-212ENST00000533957 NBPF10Q6P3W6 841 aaKnown RBP8.82□□□□□ -1
CLNS1A-212ENST00000533957 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
CLNS1A-212ENST00000533957 NBPF15Q8N660 670 aa8.82□□□□□ -1
CLNS1A-212ENST00000533957 GAS2L1Q99501 681 aaPredicted RBP8.82□□□□□ -1
CLNS1A-212ENST00000533957 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
CLNS1A-212ENST00000533957 BIVM-ERCC5R4GMW8 1640 aa8.82□□□□□ -1
CLNS1A-212ENST00000533957 SPATA31C2B4DYI2 1134 aa8.81□□□□□ -1
CLNS1A-212ENST00000533957 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
CLNS1A-212ENST00000533957 H7C1W4 665 aa8.8□□□□□ -1
CLNS1A-212ENST00000533957 GPR25O00155 361 aa8.8□□□□□ -1
CLNS1A-212ENST00000533957 GNRH1P01148 92 aa8.8□□□□□ -1
CLNS1A-212ENST00000533957 CELA2BP08218 269 aaPredicted RBP8.8□□□□□ -1
CLNS1A-212ENST00000533957 MARSP56192 900 aaKnown RBP8.8□□□□□ -1
CLNS1A-212ENST00000533957 CDCA7Q9BWT1 371 aaPredicted RBP8.8□□□□□ -1
CLNS1A-212ENST00000533957 ABCC8Q09428 1581 aa8.8□□□□□ -1
CLNS1A-212ENST00000533957 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
CLNS1A-212ENST00000533957 CENPCQ03188 943 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 CNKSR1Q969H4 720 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
CLNS1A-212ENST00000533957 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
CLNS1A-212ENST00000533957 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 TIMMDC1Q9NPL8 285 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 MBIPQ9NS73 344 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 CUX1P39880 1505 aa8.79□□□□□ -1
CLNS1A-212ENST00000533957 EIF4G3O43432 1585 aaKnown RBP8.78□□□□□ -1
CLNS1A-212ENST00000533957 IRS1P35568 1242 aa8.78□□□□□ -1
CLNS1A-212ENST00000533957 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
CLNS1A-212ENST00000533957 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
CLNS1A-212ENST00000533957 IGF1RP08069 1367 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 IL2RAP01589 272 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 F11P03951 625 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 MAP3K10Q02779 954 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 TPRNQ4KMQ1 711 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
CLNS1A-212ENST00000533957 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 PHTF2Q8N3S3 785 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 ENAMQ9NRM1 1142 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 HRH3Q9Y5N1 445 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 SYNJ1O43426 1573 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 TOP2BQ02880 1626 aa8.76□□□□□ -1.01
CLNS1A-212ENST00000533957 PBRM1Q86U86 1689 aa8.75□□□□□ -1.01
CLNS1A-212ENST00000533957 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
CLNS1A-212ENST00000533957 PRM3Q9NNZ6 103 aa8.75□□□□□ -1.01
CLNS1A-212ENST00000533957 POLA1P09884 1462 aaPredicted RBP8.75□□□□□ -1.01
CLNS1A-212ENST00000533957 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLNS1A-212ENST00000533957 IRF5Q13568 498 aa8.74□□□□□ -1.01
CLNS1A-212ENST00000533957 KANK3Q6NY19 840 aa8.74□□□□□ -1.01
CLNS1A-212ENST00000533957 NUCKS1Q9H1E3 243 aaKnown RBP8.74□□□□□ -1.01
CLNS1A-212ENST00000533957 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 IFT140Q96RY7 1462 aa8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 BCRP11274 1271 aa8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 USP4Q13107 963 aa8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 ACDQ96AP0 544 aa8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
CLNS1A-212ENST00000533957 MX2P20592 715 aa8.72□□□□□ -1.01
CLNS1A-212ENST00000533957 PHKA2P46019 1235 aa8.72□□□□□ -1.01
CLNS1A-212ENST00000533957 FAM9AQ8IZU1 332 aaPredicted RBP8.72□□□□□ -1.01
CLNS1A-212ENST00000533957 FHDC1Q9C0D6 1143 aaPredicted RBP8.72□□□□□ -1.01
CLNS1A-212ENST00000533957 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
CLNS1A-212ENST00000533957 THBS1P07996 1170 aa8.71□□□□□ -1.02
CLNS1A-212ENST00000533957 SUZ12Q15022 739 aaKnown RBP8.71□□□□□ -1.02
CLNS1A-212ENST00000533957 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
CLNS1A-212ENST00000533957 CHD1O14646 1710 aa8.71□□□□□ -1.02
CLNS1A-212ENST00000533957 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 ESCO1Q5FWF5 840 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 TMEM214Q6NUQ4 689 aaKnown RBP8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 NSFL1CQ9UNZ2 370 aaKnown RBP8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 CNTNAP5Q8WYK1 1306 aa8.7□□□□□ -1.02
CLNS1A-212ENST00000533957 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 GNASQ5JWF2 1037 aa8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 BEND7Q8N7W2 519 aaPredicted RBP8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 NEDD1Q8NHV4 660 aa8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
CLNS1A-212ENST00000533957 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
CLNS1A-212ENST00000533957 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
CLNS1A-212ENST00000533957 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
CLNS1A-212ENST00000533957 ETNK1Q9HBU6 452 aa8.68□□□□□ -1.02
CLNS1A-212ENST00000533957 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
CLNS1A-212ENST00000533957 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
CLNS1A-212ENST00000533957 GPAT2Q6NUI2 795 aa8.67□□□□□ -1.02
CLNS1A-212ENST00000533957 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
CLNS1A-212ENST00000533957 SIRT1Q96EB6 747 aa8.67□□□□□ -1.02
CLNS1A-212ENST00000533957 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
CLNS1A-212ENST00000533957 KIF21BO75037 1637 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms