RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 NUP153P49790 1475 aaKnown RBP6.91□□□□□ -1.3
USP33-218ENST00000533928 CCDC18Q5T9S5 1454 aa6.91□□□□□ -1.3
USP33-218ENST00000533928 RFC5P40937 340 aa6.9□□□□□ -1.3
USP33-218ENST00000533928 VWA5B2Q8N398 1253 aa6.9□□□□□ -1.3
USP33-218ENST00000533928 ZNF784Q8NCA9 323 aaPredicted RBP6.9□□□□□ -1.3
USP33-218ENST00000533928 NEO1Q92859 1461 aa6.9□□□□□ -1.31
USP33-218ENST00000533928 ERVH48-1M5A8F1 160 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 ITGA6P23229 1130 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 ATP10BO94823 1461 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 FYCO1Q9BQS8 1478 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 ARHGAP35Q9NRY4 1499 aa6.89□□□□□ -1.31
USP33-218ENST00000533928 LILRA1O75019 489 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 ADH1AP07327 375 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
USP33-218ENST00000533928 BRPF1P55201 1214 aaPredicted RBP6.88□□□□□ -1.31
USP33-218ENST00000533928 KCNMA1Q12791 1236 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 SV2AQ7L0J3 742 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
USP33-218ENST00000533928 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
USP33-218ENST00000533928 CDC14CA4D256 554 aa6.87□□□□□ -1.31
USP33-218ENST00000533928 ESPNB1AK53 854 aa6.87□□□□□ -1.31
USP33-218ENST00000533928 PTGIRP43119 386 aa6.87□□□□□ -1.31
USP33-218ENST00000533928 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
USP33-218ENST00000533928 FHOD3Q2V2M9 1422 aa6.86□□□□□ -1.31
USP33-218ENST00000533928 CD109Q6YHK3 1445 aa6.86□□□□□ -1.31
USP33-218ENST00000533928 CASKIN1Q8WXD9 1431 aa6.86□□□□□ -1.31
USP33-218ENST00000533928 TSPOAP1O95153 1857 aa6.86□□□□□ -1.31
USP33-218ENST00000533928 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
USP33-218ENST00000533928 ADAMTS8Q9UP79 889 aa6.86□□□□□ -1.31
USP33-218ENST00000533928 CDK11AQ9UQ88 783 aaPredicted RBP6.86□□□□□ -1.31
USP33-218ENST00000533928 CLIP1P30622 1438 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 GSK3AP49840 483 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 TPRNQ4KMQ1 711 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
USP33-218ENST00000533928 TRIM34Q9BYJ4 488 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 KIF14Q15058 1648 aa6.85□□□□□ -1.31
USP33-218ENST00000533928 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
USP33-218ENST00000533928 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
USP33-218ENST00000533928 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
USP33-218ENST00000533928 MAGI2Q86UL8 1455 aa6.84□□□□□ -1.31
USP33-218ENST00000533928 MYO5CQ9NQX4 1742 aa6.84□□□□□ -1.31
USP33-218ENST00000533928 ZMYM4Q5VZL5 1548 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 ZBBXA8MT70 800 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 SLURP2P0DP57 97 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
USP33-218ENST00000533928 TMEM151AQ8N4L1 468 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 KCTD17Q8N5Z5 321 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 WHAMMQ8TF30 809 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 TRIM52Q96A61 297 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
USP33-218ENST00000533928 TROQ12816 1431 aaPredicted RBP6.83□□□□□ -1.32
USP33-218ENST00000533928 PLEKHD1A6NEE1 506 aa6.82□□□□□ -1.32
USP33-218ENST00000533928 GIGYF1O75420 1035 aaPredicted RBP6.82□□□□□ -1.32
USP33-218ENST00000533928 RASSF7Q02833 373 aa6.82□□□□□ -1.32
USP33-218ENST00000533928 PCF11O94913 1555 aaKnown RBP6.82□□□□□ -1.32
USP33-218ENST00000533928 MAP3K1Q13233 1512 aa6.81□□□□□ -1.32
USP33-218ENST00000533928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP33-218ENST00000533928 RNF225M0QZC1 329 aaPredicted RBP6.81□□□□□ -1.32
USP33-218ENST00000533928 GDF11O95390 407 aa6.81□□□□□ -1.32
USP33-218ENST00000533928 RNF144AP50876 292 aaPredicted RBP6.81□□□□□ -1.32
USP33-218ENST00000533928 PRICKLE2Q7Z3G6 844 aa6.81□□□□□ -1.32
USP33-218ENST00000533928 PREX2Q70Z35 1606 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 ATP5J2-PTCD1G3V325 749 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 PLCH2O75038 1416 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 FBXO45P0C2W1 286 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 RHOQP17081 205 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 RICTORQ6R327 1708 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
USP33-218ENST00000533928 CUEDC1Q9NWM3 386 aaPredicted RBP6.8□□□□□ -1.32
USP33-218ENST00000533928 EHBP1L1Q8N3D4 1523 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 ARHGEF40Q8TER5 1519 aa6.8□□□□□ -1.32
USP33-218ENST00000533928 FANCAO15360 1455 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 LRRIQ1Q96JM4 1722 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 TTC37Q6PGP7 1564 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 REREQ9P2R6 1566 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 MEN1O00255 615 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 ARHGEF15O94989 841 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 ADAMTS2O95450 1211 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
USP33-218ENST00000533928 CEP162Q5TB80 1403 aa6.78□□□□□ -1.32
USP33-218ENST00000533928 CDK13Q14004 1512 aaKnown RBP6.78□□□□□ -1.32
USP33-218ENST00000533928 A0A1W2PRU2 124 aa6.78□□□□□ -1.32
USP33-218ENST00000533928 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
USP33-218ENST00000533928 SRSF11Q05519 484 aaKnown RBP6.78□□□□□ -1.32
USP33-218ENST00000533928 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
USP33-218ENST00000533928 DENND4BO75064 1496 aaPredicted RBP6.78□□□□□ -1.32
USP33-218ENST00000533928 ZNF518AQ6AHZ1 1483 aa6.78□□□□□ -1.32
USP33-218ENST00000533928 KDM5CP41229 1560 aa6.78□□□□□ -1.32
USP33-218ENST00000533928 GAS6Q14393 721 aa6.77□□□□□ -1.33
USP33-218ENST00000533928 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
USP33-218ENST00000533928 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
USP33-218ENST00000533928 FRMPD1Q5SYB0 1578 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms