RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
USP33-218ENST00000533928 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
USP33-218ENST00000533928 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
USP33-218ENST00000533928 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
USP33-218ENST00000533928 FOXD1Q16676 465 aa16.33■□□□□ 0.2
USP33-218ENST00000533928 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
USP33-218ENST00000533928 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
USP33-218ENST00000533928 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
USP33-218ENST00000533928 ADRA2BP18089 450 aa15.27■□□□□ 0.04
USP33-218ENST00000533928 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
USP33-218ENST00000533928 MSH5O43196 834 aa15.25■□□□□ 0.03
USP33-218ENST00000533928 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
USP33-218ENST00000533928 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
USP33-218ENST00000533928 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
USP33-218ENST00000533928 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
USP33-218ENST00000533928 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
USP33-218ENST00000533928 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
USP33-218ENST00000533928 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
USP33-218ENST00000533928 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
USP33-218ENST00000533928 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
USP33-218ENST00000533928 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
USP33-218ENST00000533928 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
USP33-218ENST00000533928 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
USP33-218ENST00000533928 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
USP33-218ENST00000533928 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
USP33-218ENST00000533928 KCNA4P22459 653 aa12.79□□□□□ -0.36
USP33-218ENST00000533928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP33-218ENST00000533928 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
USP33-218ENST00000533928 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
USP33-218ENST00000533928 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
USP33-218ENST00000533928 CAPN15O75808 1086 aa12.31□□□□□ -0.44
USP33-218ENST00000533928 DSG3P32926 999 aa12.21□□□□□ -0.45
USP33-218ENST00000533928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
USP33-218ENST00000533928 APLP2Q06481 763 aa12.17□□□□□ -0.46
USP33-218ENST00000533928 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
USP33-218ENST00000533928 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
USP33-218ENST00000533928 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
USP33-218ENST00000533928 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
USP33-218ENST00000533928 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
USP33-218ENST00000533928 ABCB7O75027 752 aa12.02□□□□□ -0.49
USP33-218ENST00000533928 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
USP33-218ENST00000533928 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
USP33-218ENST00000533928 POTEHQ6S545 545 aa11.86□□□□□ -0.51
USP33-218ENST00000533928 POLA2Q14181 598 aa11.81□□□□□ -0.52
USP33-218ENST00000533928 ZBTB22O15209 634 aa11.75□□□□□ -0.53
USP33-218ENST00000533928 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
USP33-218ENST00000533928 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
USP33-218ENST00000533928 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
USP33-218ENST00000533928 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
USP33-218ENST00000533928 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
USP33-218ENST00000533928 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
USP33-218ENST00000533928 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
USP33-218ENST00000533928 FBLN2P98095 1184 aa11.3□□□□□ -0.6
USP33-218ENST00000533928 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
USP33-218ENST00000533928 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
USP33-218ENST00000533928 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
USP33-218ENST00000533928 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
USP33-218ENST00000533928 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
USP33-218ENST00000533928 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
USP33-218ENST00000533928 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
USP33-218ENST00000533928 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
USP33-218ENST00000533928 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
USP33-218ENST00000533928 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
USP33-218ENST00000533928 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
USP33-218ENST00000533928 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
USP33-218ENST00000533928 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
USP33-218ENST00000533928 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
USP33-218ENST00000533928 HAX1O00165 279 aa10.93□□□□□ -0.66
USP33-218ENST00000533928 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP33-218ENST00000533928 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
USP33-218ENST00000533928 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
USP33-218ENST00000533928 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
USP33-218ENST00000533928 EVX2Q03828 476 aa10.79□□□□□ -0.68
USP33-218ENST00000533928 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
USP33-218ENST00000533928 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
USP33-218ENST00000533928 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
USP33-218ENST00000533928 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
USP33-218ENST00000533928 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
USP33-218ENST00000533928 GABBR2O75899 941 aa10.55□□□□□ -0.72
USP33-218ENST00000533928 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
USP33-218ENST00000533928 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
USP33-218ENST00000533928 PROM2Q8N271 834 aa10.43□□□□□ -0.74
USP33-218ENST00000533928 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
USP33-218ENST00000533928 NISCHQ9Y2I1 1504 aa10.39□□□□□ -0.75
USP33-218ENST00000533928 CLCN6P51797 869 aa10.39□□□□□ -0.75
USP33-218ENST00000533928 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
USP33-218ENST00000533928 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
USP33-218ENST00000533928 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
USP33-218ENST00000533928 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
USP33-218ENST00000533928 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
USP33-218ENST00000533928 DCBLD2Q96PD2 775 aa10.28□□□□□ -0.76
USP33-218ENST00000533928 LHX8Q68G74 356 aa10.26□□□□□ -0.77
USP33-218ENST00000533928 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
USP33-218ENST00000533928 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
USP33-218ENST00000533928 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
USP33-218ENST00000533928 MIER1Q8N108 512 aa10.24□□□□□ -0.77
USP33-218ENST00000533928 FKBP8Q14318 412 aa10.22□□□□□ -0.77
USP33-218ENST00000533928 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
USP33-218ENST00000533928 TSPYL2Q9H2G4 693 aaPredicted RBP10.18□□□□□ -0.78
USP33-218ENST00000533928 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms