RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CLN3Q13286 438 aa7.13□□□□□ -1.27
BRCA2-205ENST00000533776 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
BRCA2-205ENST00000533776 GAS2L1Q99501 681 aaPredicted RBP7.13□□□□□ -1.27
BRCA2-205ENST00000533776 CDCA7Q9BWT1 371 aaPredicted RBP7.13□□□□□ -1.27
BRCA2-205ENST00000533776 SEMA6BQ9H3T3 888 aa7.13□□□□□ -1.27
BRCA2-205ENST00000533776 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
BRCA2-205ENST00000533776 CEP126Q9P2H0 1117 aa7.13□□□□□ -1.27
BRCA2-205ENST00000533776 IGF1RP08069 1367 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 GPR25O00155 361 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 SNRPNP63162 240 aaKnown RBP7.12□□□□□ -1.27
BRCA2-205ENST00000533776 ACDQ96AP0 544 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 PRM3Q9NNZ6 103 aa7.12□□□□□ -1.27
BRCA2-205ENST00000533776 MYCP01106 439 aaPredicted RBP7.11□□□□□ -1.27
BRCA2-205ENST00000533776 IRF5Q13568 498 aa7.11□□□□□ -1.27
BRCA2-205ENST00000533776 FOXD4L6Q3SYB3 417 aaPredicted RBP7.11□□□□□ -1.27
BRCA2-205ENST00000533776 NBPF10Q6P3W6 841 aaKnown RBP7.11□□□□□ -1.27
BRCA2-205ENST00000533776 FOXD4L3Q6VB84 417 aaPredicted RBP7.11□□□□□ -1.27
BRCA2-205ENST00000533776 TRIM22Q8IYM9 498 aa7.11□□□□□ -1.27
BRCA2-205ENST00000533776 NBPF15Q8N660 670 aa7.11□□□□□ -1.27
BRCA2-205ENST00000533776 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
BRCA2-205ENST00000533776 IL2RAP01589 272 aa7.1□□□□□ -1.27
BRCA2-205ENST00000533776 EIF4G2P78344 907 aaKnown RBP eCLIP7.1□□□□□ -1.27
BRCA2-205ENST00000533776 DBN1Q16643 649 aa7.1□□□□□ -1.27
BRCA2-205ENST00000533776 CNKSR1Q969H4 720 aa7.1□□□□□ -1.27
BRCA2-205ENST00000533776 SPATA31C2B4DYI2 1134 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 WASLO00401 505 aaPredicted RBP7.09□□□□□ -1.27
BRCA2-205ENST00000533776 GNRH1P01148 92 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 ABL2P42684 1182 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 TSGA10IPQ3SY00 556 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 TAS1R3Q7RTX0 852 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 KRTAP4-2Q9BYR5 136 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 GDPD2Q9HCC8 539 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 DOLKQ9UPQ8 538 aa7.09□□□□□ -1.27
BRCA2-205ENST00000533776 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 CENPCQ03188 943 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 SLFNL1Q499Z3 407 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 ARTNQ5T4W7 220 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 FOXR1Q6PIV2 292 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 RNF135Q8IUD6 432 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 GTPBP3Q969Y2 492 aaKnown RBP7.08□□□□□ -1.28
BRCA2-205ENST00000533776 GMCL1Q96IK5 515 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 ESYT1Q9BSJ8 1104 aa7.08□□□□□ -1.28
BRCA2-205ENST00000533776 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
BRCA2-205ENST00000533776 H7C1W4 665 aa7.07□□□□□ -1.28
BRCA2-205ENST00000533776 STAU1O95793 577 aaKnown RBP7.07□□□□□ -1.28
BRCA2-205ENST00000533776 PHKA2P46019 1235 aa7.07□□□□□ -1.28
BRCA2-205ENST00000533776 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
BRCA2-205ENST00000533776 GPAMQ9HCL2 828 aa7.07□□□□□ -1.28
BRCA2-205ENST00000533776 ZFP64Q9NPA5 681 aa7.07□□□□□ -1.28
BRCA2-205ENST00000533776 OIP5O43482 229 aa7.06□□□□□ -1.28
BRCA2-205ENST00000533776 PRKCSHP14314 528 aaPredicted RBP7.06□□□□□ -1.28
BRCA2-205ENST00000533776 CD163Q86VB7 1156 aa7.06□□□□□ -1.28
BRCA2-205ENST00000533776 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
BRCA2-205ENST00000533776 F11P03951 625 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 GTF2E1P29083 439 aaPredicted RBP7.05□□□□□ -1.28
BRCA2-205ENST00000533776 WDR44Q5JSH3 913 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 TMEM214Q6NUQ4 689 aaKnown RBP7.05□□□□□ -1.28
BRCA2-205ENST00000533776 PHTF2Q8N3S3 785 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 FHDC1Q9C0D6 1143 aaPredicted RBP7.05□□□□□ -1.28
BRCA2-205ENST00000533776 MKL2Q9ULH7 1088 aa7.05□□□□□ -1.28
BRCA2-205ENST00000533776 USP4Q13107 963 aa7.04□□□□□ -1.28
BRCA2-205ENST00000533776 ESCO1Q5FWF5 840 aa7.04□□□□□ -1.28
BRCA2-205ENST00000533776 GNASQ5JWF2 1037 aa7.04□□□□□ -1.28
BRCA2-205ENST00000533776 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
BRCA2-205ENST00000533776 HRH3Q9Y5N1 445 aa7.04□□□□□ -1.28
BRCA2-205ENST00000533776 DOC2BQ14184 412 aa7.03□□□□□ -1.28
BRCA2-205ENST00000533776 MCM6Q14566 821 aa7.03□□□□□ -1.28
BRCA2-205ENST00000533776 C4orf17Q53FE4 359 aa7.03□□□□□ -1.28
BRCA2-205ENST00000533776 THBS1P07996 1170 aa7.02□□□□□ -1.29
BRCA2-205ENST00000533776 MX2P20592 715 aa7.02□□□□□ -1.29
BRCA2-205ENST00000533776 TLR1Q15399 786 aa7.02□□□□□ -1.29
BRCA2-205ENST00000533776 WASHC4Q2M389 1173 aa7.02□□□□□ -1.29
BRCA2-205ENST00000533776 A0A1B0GTH6 734 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 CHRNA4P43681 627 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 SEMA3FQ13275 785 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 SIRT1Q96EB6 747 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 RUBCNLQ9H714 662 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 CHIC2Q9UKJ5 165 aa7.01□□□□□ -1.29
BRCA2-205ENST00000533776 COBLO75128 1261 aa7□□□□□ -1.29
BRCA2-205ENST00000533776 NBPF11Q86T75 865 aa7□□□□□ -1.29
BRCA2-205ENST00000533776 RHBDD1Q8TEB9 315 aa7□□□□□ -1.29
BRCA2-205ENST00000533776 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
BRCA2-205ENST00000533776 NSFL1CQ9UNZ2 370 aaKnown RBP7□□□□□ -1.29
BRCA2-205ENST00000533776 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 MSX1P28360 303 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 PLA2G4AP47712 749 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 GDF10P55107 478 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 PGBD3Q8N328 593 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
BRCA2-205ENST00000533776 SHISA8B8ZZ34 492 aa6.98□□□□□ -1.29
BRCA2-205ENST00000533776 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms