RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 PHF24Q9UPV7 400 aa9.76□□□□□ -0.85
PCM1-223ENST00000524356 CC2D2BQ6DHV5 1058 aa9.75□□□□□ -0.85
PCM1-223ENST00000524356 TRIM52Q96A61 297 aa9.75□□□□□ -0.85
PCM1-223ENST00000524356 AP1G2O75843 785 aa9.74□□□□□ -0.85
PCM1-223ENST00000524356 SCTRP47872 440 aa9.74□□□□□ -0.85
PCM1-223ENST00000524356 BTBD6Q96KE9 485 aa9.74□□□□□ -0.85
PCM1-223ENST00000524356 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
PCM1-223ENST00000524356 PNMA1Q8ND90 353 aa9.73□□□□□ -0.85
PCM1-223ENST00000524356 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCM1-223ENST00000524356 KRTAP9-9Q9BYP9 154 aa9.73□□□□□ -0.85
PCM1-223ENST00000524356 KRTAP9-4Q9BYQ2 154 aa9.73□□□□□ -0.85
PCM1-223ENST00000524356 PIK3R2O00459 728 aa9.72□□□□□ -0.85
PCM1-223ENST00000524356 EPXP11678 715 aa9.72□□□□□ -0.85
PCM1-223ENST00000524356 BMP4P12644 408 aa9.72□□□□□ -0.85
PCM1-223ENST00000524356 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
PCM1-223ENST00000524356 PROCA1Q8NCQ7 364 aaPredicted RBP9.72□□□□□ -0.85
PCM1-223ENST00000524356 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
PCM1-223ENST00000524356 ATXN7L1Q9ULK2 861 aaPredicted RBP9.71□□□□□ -0.86
PCM1-223ENST00000524356 TRAK2O60296 914 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 PHKA2P46019 1235 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 CTBSQ01459 385 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 OSBPL3Q9H4L5 887 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 NDFIP2Q9NV92 336 aa9.7□□□□□ -0.86
PCM1-223ENST00000524356 A0A1B0GTH6 734 aa9.69□□□□□ -0.86
PCM1-223ENST00000524356 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
PCM1-223ENST00000524356 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
PCM1-223ENST00000524356 RUBCNLQ9H714 662 aa9.69□□□□□ -0.86
PCM1-223ENST00000524356 PCDHB9Q9Y5E1 797 aa9.69□□□□□ -0.86
PCM1-223ENST00000524356 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
PCM1-223ENST00000524356 FGFR3P22607 806 aa9.68□□□□□ -0.86
PCM1-223ENST00000524356 LBRQ14739 615 aaKnown RBP9.68□□□□□ -0.86
PCM1-223ENST00000524356 RSPO4Q2I0M5 234 aaPredicted RBP9.68□□□□□ -0.86
PCM1-223ENST00000524356 RNF135Q8IUD6 432 aa9.68□□□□□ -0.86
PCM1-223ENST00000524356 BNIP3LO60238 219 aa9.66□□□□□ -0.86
PCM1-223ENST00000524356 IL2RAP01589 272 aa9.66□□□□□ -0.86
PCM1-223ENST00000524356 GATA4P43694 442 aa9.66□□□□□ -0.86
PCM1-223ENST00000524356 CCDC125Q86Z20 511 aa9.66□□□□□ -0.86
PCM1-223ENST00000524356 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 ARAFP10398 606 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 CENPCQ03188 943 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 NKAPLQ5M9Q1 402 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 KRTAP19-1Q8IUB9 90 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 CNKSR1Q969H4 720 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 TRIM34Q9BYJ4 488 aa9.65□□□□□ -0.86
PCM1-223ENST00000524356 ZBBXA8MT70 800 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 MSX1P28360 303 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 CHSY3Q70JA7 882 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
PCM1-223ENST00000524356 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
PCM1-223ENST00000524356 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
PCM1-223ENST00000524356 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
PCM1-223ENST00000524356 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
PCM1-223ENST00000524356 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
PCM1-223ENST00000524356 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
PCM1-223ENST00000524356 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
PCM1-223ENST00000524356 FHDC1Q9C0D6 1143 aaPredicted RBP9.62□□□□□ -0.87
PCM1-223ENST00000524356 ZFP64Q9NPA5 681 aa9.62□□□□□ -0.87
PCM1-223ENST00000524356 KRTAP4-8A0A0G2JLE6 195 aa9.61□□□□□ -0.87
PCM1-223ENST00000524356 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
PCM1-223ENST00000524356 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
PCM1-223ENST00000524356 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
PCM1-223ENST00000524356 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
PCM1-223ENST00000524356 GNRH1P01148 92 aa9.6□□□□□ -0.87
PCM1-223ENST00000524356 KLF15Q9UIH9 416 aa9.6□□□□□ -0.87
PCM1-223ENST00000524356 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
PCM1-223ENST00000524356 BTBD11A6QL63 1104 aa9.59□□□□□ -0.87
PCM1-223ENST00000524356 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
PCM1-223ENST00000524356 DYRK3O43781 588 aa9.58□□□□□ -0.88
PCM1-223ENST00000524356 SPATA31C1P0DKV0 1188 aa9.58□□□□□ -0.88
PCM1-223ENST00000524356 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
PCM1-223ENST00000524356 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
PCM1-223ENST00000524356 CRISPLD1Q9H336 500 aa9.58□□□□□ -0.88
PCM1-223ENST00000524356 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
PCM1-223ENST00000524356 GNASQ5JWF2 1037 aa9.57□□□□□ -0.88
PCM1-223ENST00000524356 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
PCM1-223ENST00000524356 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
PCM1-223ENST00000524356 XAGE2Q96GT9 111 aa9.56□□□□□ -0.88
PCM1-223ENST00000524356 ADH6P28332 368 aa9.54□□□□□ -0.88
PCM1-223ENST00000524356 RFC5P40937 340 aa9.54□□□□□ -0.88
PCM1-223ENST00000524356 ZCCHC2Q9C0B9 1178 aaKnown RBP9.54□□□□□ -0.88
PCM1-223ENST00000524356 PRSS36Q5K4E3 855 aa9.53□□□□□ -0.88
PCM1-223ENST00000524356 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
PCM1-223ENST00000524356 PCDHGC4Q9Y5F7 938 aa9.53□□□□□ -0.88
PCM1-223ENST00000524356 NBPF11Q86T75 865 aa9.52□□□□□ -0.89
PCM1-223ENST00000524356 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
PCM1-223ENST00000524356 FIGNL1Q6PIW4 674 aa9.51□□□□□ -0.89
PCM1-223ENST00000524356 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
PCM1-223ENST00000524356 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
PCM1-223ENST00000524356 CD33P20138 364 aa9.5□□□□□ -0.89
PCM1-223ENST00000524356 ATP4AP20648 1035 aa9.5□□□□□ -0.89
PCM1-223ENST00000524356 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
PCM1-223ENST00000524356 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
PCM1-223ENST00000524356 DCDC2BA2VCK2 349 aa9.49□□□□□ -0.89
PCM1-223ENST00000524356 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
PCM1-223ENST00000524356 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
PCM1-223ENST00000524356 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms