RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 IL2RAP01589 272 aa10.06□□□□□ -0.8
CLK4-207ENST00000520909 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
CLK4-207ENST00000520909 CDCA7Q9BWT1 371 aaPredicted RBP10.06□□□□□ -0.8
CLK4-207ENST00000520909 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
CLK4-207ENST00000520909 PHKA2P46019 1235 aa10.05□□□□□ -0.8
CLK4-207ENST00000520909 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
CLK4-207ENST00000520909 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
CLK4-207ENST00000520909 GPAMQ9HCL2 828 aa10.05□□□□□ -0.8
CLK4-207ENST00000520909 PRM3Q9NNZ6 103 aa10.05□□□□□ -0.8
CLK4-207ENST00000520909 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
CLK4-207ENST00000520909 A0A1B0GTH6 734 aa10.04□□□□□ -0.8
CLK4-207ENST00000520909 ITGB2P05107 769 aa10.04□□□□□ -0.8
CLK4-207ENST00000520909 MAP2K3P46734 347 aa10.04□□□□□ -0.8
CLK4-207ENST00000520909 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
CLK4-207ENST00000520909 TMEM214Q6NUQ4 689 aaKnown RBP10.04□□□□□ -0.8
CLK4-207ENST00000520909 SPOCK3Q9BQ16 436 aa10.04□□□□□ -0.8
CLK4-207ENST00000520909 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
CLK4-207ENST00000520909 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLK4-207ENST00000520909 USP4Q13107 963 aa10.03□□□□□ -0.8
CLK4-207ENST00000520909 ESCO1Q5FWF5 840 aa10.03□□□□□ -0.8
CLK4-207ENST00000520909 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
CLK4-207ENST00000520909 OIP5O43482 229 aa10.02□□□□□ -0.81
CLK4-207ENST00000520909 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
CLK4-207ENST00000520909 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
CLK4-207ENST00000520909 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
CLK4-207ENST00000520909 HRH3Q9Y5N1 445 aa10.02□□□□□ -0.81
CLK4-207ENST00000520909 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
CLK4-207ENST00000520909 KRTAP4-8Q9BYQ9 185 aa10□□□□□ -0.81
CLK4-207ENST00000520909 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
CLK4-207ENST00000520909 THBS1P07996 1170 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 SLFNL1Q499Z3 407 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 C4orf17Q53FE4 359 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 DOLKQ9UPQ8 538 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
CLK4-207ENST00000520909 PROCP04070 461 aa9.98□□□□□ -0.81
CLK4-207ENST00000520909 EFHC2Q5JST6 749 aa9.98□□□□□ -0.81
CLK4-207ENST00000520909 GALNT6Q8NCL4 622 aa9.98□□□□□ -0.81
CLK4-207ENST00000520909 KLRG1Q96E93 195 aa9.98□□□□□ -0.81
CLK4-207ENST00000520909 SIRT1Q96EB6 747 aa9.98□□□□□ -0.81
CLK4-207ENST00000520909 MSX1P28360 303 aa9.97□□□□□ -0.81
CLK4-207ENST00000520909 PHTF2Q8N3S3 785 aa9.97□□□□□ -0.81
CLK4-207ENST00000520909 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
CLK4-207ENST00000520909 GDF2Q9UK05 429 aaPredicted RBP9.97□□□□□ -0.81
CLK4-207ENST00000520909 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.82
CLK4-207ENST00000520909 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
CLK4-207ENST00000520909 RNF135Q8IUD6 432 aa9.95□□□□□ -0.82
CLK4-207ENST00000520909 EDARADDQ8WWZ3 215 aa9.95□□□□□ -0.82
CLK4-207ENST00000520909 ETNK1Q9HBU6 452 aa9.95□□□□□ -0.82
CLK4-207ENST00000520909 ATXN7L1Q9ULK2 861 aaPredicted RBP9.95□□□□□ -0.82
CLK4-207ENST00000520909 SNRPNP63162 240 aaKnown RBP9.94□□□□□ -0.82
CLK4-207ENST00000520909 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
CLK4-207ENST00000520909 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
CLK4-207ENST00000520909 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
CLK4-207ENST00000520909 BMP4P12644 408 aa9.93□□□□□ -0.82
CLK4-207ENST00000520909 TLR1Q15399 786 aa9.93□□□□□ -0.82
CLK4-207ENST00000520909 GOLGA6L1Q8N7Z2 621 aa9.93□□□□□ -0.82
CLK4-207ENST00000520909 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
CLK4-207ENST00000520909 SHISA8B8ZZ34 492 aa9.92□□□□□ -0.82
CLK4-207ENST00000520909 IRF5Q13568 498 aa9.92□□□□□ -0.82
CLK4-207ENST00000520909 C1orf229Q6ZS94 237 aaPredicted RBP9.92□□□□□ -0.82
CLK4-207ENST00000520909 STAU1O95793 577 aaKnown RBP9.91□□□□□ -0.82
CLK4-207ENST00000520909 FGFR3P22607 806 aa9.9□□□□□ -0.82
CLK4-207ENST00000520909 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
CLK4-207ENST00000520909 ABHD17AQ96GS6 310 aa9.9□□□□□ -0.82
CLK4-207ENST00000520909 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
CLK4-207ENST00000520909 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
CLK4-207ENST00000520909 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
CLK4-207ENST00000520909 BNIP3LO60238 219 aa9.89□□□□□ -0.83
CLK4-207ENST00000520909 INHAP05111 366 aa9.89□□□□□ -0.83
CLK4-207ENST00000520909 AMPD1P23109 780 aa9.89□□□□□ -0.83
CLK4-207ENST00000520909 VAC14Q08AM6 782 aa9.89□□□□□ -0.83
CLK4-207ENST00000520909 FIGNL1Q6PIW4 674 aa9.89□□□□□ -0.83
CLK4-207ENST00000520909 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
CLK4-207ENST00000520909 C2CD2LO14523 706 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 CTBSQ01459 385 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 NIFKQ9BYG3 293 aaKnown RBP9.88□□□□□ -0.83
CLK4-207ENST00000520909 NDFIP2Q9NV92 336 aa9.88□□□□□ -0.83
CLK4-207ENST00000520909 GDF10P55107 478 aa9.87□□□□□ -0.83
CLK4-207ENST00000520909 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
CLK4-207ENST00000520909 Q8N3U1 123 aa9.87□□□□□ -0.83
CLK4-207ENST00000520909 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
CLK4-207ENST00000520909 PCDHGC4Q9Y5F7 938 aa9.87□□□□□ -0.83
CLK4-207ENST00000520909 SCNN1DP51172 638 aa9.86□□□□□ -0.83
CLK4-207ENST00000520909 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
CLK4-207ENST00000520909 NLRP8Q86W28 1048 aa9.86□□□□□ -0.83
CLK4-207ENST00000520909 ZCCHC2Q9C0B9 1178 aaKnown RBP9.86□□□□□ -0.83
CLK4-207ENST00000520909 GDPD2Q9HCC8 539 aa9.86□□□□□ -0.83
CLK4-207ENST00000520909 KRBA1A5PL33 1030 aa9.85□□□□□ -0.83
CLK4-207ENST00000520909 PIK3R2O00459 728 aa9.85□□□□□ -0.83
CLK4-207ENST00000520909 ABL2P42684 1182 aa9.85□□□□□ -0.83
CLK4-207ENST00000520909 SMTNP53814 917 aa9.85□□□□□ -0.83
CLK4-207ENST00000520909 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
CLK4-207ENST00000520909 PLPP7Q8NBV4 271 aa9.84□□□□□ -0.83
CLK4-207ENST00000520909 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.83□□□□□ -0.84
CLK4-207ENST00000520909 ARAFP10398 606 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms