RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 ITGB2P05107 769 aa4.3□□□□□ -1.72
RNU6-561P-201ENST00000516222 TMEM214Q6NUQ4 689 aaKnown RBP4.3□□□□□ -1.72
RNU6-561P-201ENST00000516222 EPS8L1Q8TE68 723 aa4.3□□□□□ -1.72
RNU6-561P-201ENST00000516222 ZSCAN10Q96SZ4 725 aaPredicted RBP4.3□□□□□ -1.72
RNU6-561P-201ENST00000516222 ATXN7L1Q9ULK2 861 aaPredicted RBP4.3□□□□□ -1.72
RNU6-561P-201ENST00000516222 ESCO1Q5FWF5 840 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 FIGNL1Q6PIW4 674 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 CNKSR1Q969H4 720 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 ESYT1Q9BSJ8 1104 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 ARHGEF10LQ9HCE6 1279 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 GPAMQ9HCL2 828 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 HMX1Q9NP08 348 aaPredicted RBP4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 PCDHB11Q9Y5F2 797 aa4.29□□□□□ -1.72
RNU6-561P-201ENST00000516222 RFC5P40937 340 aa4.28□□□□□ -1.72
RNU6-561P-201ENST00000516222 PHKA2P46019 1235 aa4.28□□□□□ -1.72
RNU6-561P-201ENST00000516222 CENPCQ03188 943 aa4.28□□□□□ -1.72
RNU6-561P-201ENST00000516222 PSMG3-AS1Q96PY0 264 aa4.28□□□□□ -1.72
RNU6-561P-201ENST00000516222 SPDYE3A6NKU9 549 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 C1QTNF9BB2RNN3 333 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 SHISA8B8ZZ34 492 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 APBB1O00213 710 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 SLCO4C1Q6ZQN7 724 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 BTBD6Q96KE9 485 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 PCMTD1Q96MG8 357 aaPredicted RBP4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 KDM4CQ9H3R0 1056 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 GGA1Q9UJY5 639 aa4.27□□□□□ -1.73
RNU6-561P-201ENST00000516222 FBXO45P0C2W1 286 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 ARAFP10398 606 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 FGFR3P22607 806 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 COL8A1P27658 744 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 NR1H3Q13133 447 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 FAM117AQ9C073 453 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 SEMA6BQ9H3T3 888 aa4.26□□□□□ -1.73
RNU6-561P-201ENST00000516222 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 TRAK2O60296 914 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 EPXP11678 715 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 MSX1P28360 303 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 GATA4P43694 442 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 USP4Q13107 963 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 ZMYM1Q5SVZ6 1142 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 LINC00114Q6XXX2 140 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 TBC1D9Q6ZT07 1266 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 CD163Q86VB7 1156 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 C1orf216Q8TAB5 229 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 SIRT1Q96EB6 747 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 OSBPL3Q9H4L5 887 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 RUBCNLQ9H714 662 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 RAB6BQ9NRW1 208 aa4.25□□□□□ -1.73
RNU6-561P-201ENST00000516222 ALAS2P22557 587 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 ADH6P28332 368 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 SCTRP47872 440 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 C1orf229Q6ZS94 237 aaPredicted RBP4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 RNF135Q8IUD6 432 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 RHBDD1Q8TEB9 315 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 ABHD17AQ96GS6 310 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 XAGE2Q96GT9 111 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 TRIM34Q9BYJ4 488 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 SUV39H2Q9H5I1 410 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 GOPCQ9HD26 462 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 PCDHGC4Q9Y5F7 938 aa4.24□□□□□ -1.73
RNU6-561P-201ENST00000516222 NEURL1BA8MQ27 555 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 BNIP3LO60238 219 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 SPATA31C1P0DKV0 1188 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 CTBSQ01459 385 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 DOC2BQ14184 412 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 C4orf17Q53FE4 359 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 PRRT3Q5FWE3 981 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 FBXO31Q5XUX0 539 aaPredicted RBP4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 NLRP8Q86W28 1048 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 AIDAQ96BJ3 306 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 PRM3Q9NNZ6 103 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 AVENQ9NQS1 362 aaPredicted RBP4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 PRR12Q9ULL5 1215 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 GJA3Q9Y6H8 435 aa4.23□□□□□ -1.73
RNU6-561P-201ENST00000516222 APBA3O96018 575 aa4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 IL2RAP01589 272 aa4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 ARSJQ5FYB0 599 aaPredicted RBP4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 CHSY3Q70JA7 882 aa4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 NBPF11Q86T75 865 aa4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 PPARGC1BQ86YN6 1023 aaKnown RBP4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 CRISPLD1Q9H336 500 aa4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 GPBP1L1Q9HC44 474 aaPredicted RBP4.22□□□□□ -1.73
RNU6-561P-201ENST00000516222 C2CD2LO14523 706 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 ATXN7O15265 892 aaPredicted RBP4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 TATP17735 454 aaPredicted RBP4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 CHRNA4P43681 627 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 DGKGP49619 791 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 TLR1Q15399 786 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 NBPF1Q3BBV0 1214 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 NIFKQ9BYG3 293 aaKnown RBP4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 ZCCHC2Q9C0B9 1178 aaKnown RBP4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 NDUFB9Q9Y6M9 179 aa4.21□□□□□ -1.74
RNU6-561P-201ENST00000516222 EIF4G2P78344 907 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 SLFNL1Q499Z3 407 aa4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 FAM182BQ5T319 152 aa4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 NACC1Q96RE7 527 aa4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 PLVAPQ9BX97 442 aa4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 NDFIP2Q9NV92 336 aa4.2□□□□□ -1.74
RNU6-561P-201ENST00000516222 CEP126Q9P2H0 1117 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms