RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 A0A1B0GTH6 734 aa6.63□□□□□ -1.35
XRCC4-204ENST00000509268 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
XRCC4-204ENST00000509268 THBS1P07996 1170 aa6.63□□□□□ -1.35
XRCC4-204ENST00000509268 SKIV2LQ15477 1246 aaKnown RBP6.63□□□□□ -1.35
XRCC4-204ENST00000509268 GGA1Q9UJY5 639 aa6.63□□□□□ -1.35
XRCC4-204ENST00000509268 EPXP11678 715 aa6.62□□□□□ -1.35
XRCC4-204ENST00000509268 GATA4P43694 442 aa6.62□□□□□ -1.35
XRCC4-204ENST00000509268 DGKGP49619 791 aa6.62□□□□□ -1.35
XRCC4-204ENST00000509268 UBAP2LQ14157 1087 aaKnown RBP6.62□□□□□ -1.35
XRCC4-204ENST00000509268 BTBD11A6QL63 1104 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 CSB-PGBD3P0DP91 1061 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 ARAFP10398 606 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 PGBD3Q8N328 593 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 C2CD2LO14523 706 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 AP1G2O75843 785 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 MCCD1P59942 119 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-204ENST00000509268 EFHC2Q5JST6 749 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 EPS8L1Q8TE68 723 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 GPAMQ9HCL2 828 aa6.61□□□□□ -1.35
XRCC4-204ENST00000509268 ESF1Q9H501 851 aaKnown RBP6.6□□□□□ -1.35
XRCC4-204ENST00000509268 TRAK2O60296 914 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 FGFR3P22607 806 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 ARTNQ5T4W7 220 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 ESYT1Q9BSJ8 1104 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.59□□□□□ -1.35
XRCC4-204ENST00000509268 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.35
XRCC4-204ENST00000509268 GNRH1P01148 92 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 GTF2E1P29083 439 aaPredicted RBP6.58□□□□□ -1.36
XRCC4-204ENST00000509268 CENPCQ03188 943 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 ZNF592Q92610 1267 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 ARHGEF10LQ9HCE6 1279 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 NDFIP2Q9NV92 336 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 PCDHB9Q9Y5E1 797 aa6.58□□□□□ -1.36
XRCC4-204ENST00000509268 ZBBXA8MT70 800 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 CTBSQ01459 385 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 RSPO4Q2I0M5 234 aaPredicted RBP6.57□□□□□ -1.36
XRCC4-204ENST00000509268 GNASQ5JWF2 1037 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 SH3D19Q5HYK7 790 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 NKAPLQ5M9Q1 402 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 FBXO31Q5XUX0 539 aaPredicted RBP6.57□□□□□ -1.36
XRCC4-204ENST00000509268 CHSY3Q70JA7 882 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 ZSCAN10Q96SZ4 725 aaPredicted RBP6.57□□□□□ -1.36
XRCC4-204ENST00000509268 OSBPL3Q9H4L5 887 aa6.57□□□□□ -1.36
XRCC4-204ENST00000509268 HMX1Q9NP08 348 aaPredicted RBP6.57□□□□□ -1.36
XRCC4-204ENST00000509268 BNIP3LO60238 219 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 USP17L8P0C7I0 530 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 MSX1P28360 303 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 PHKA2P46019 1235 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 FIGNL1Q6PIW4 674 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 NBPF11Q86T75 865 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 RUBCNLQ9H714 662 aa6.56□□□□□ -1.36
XRCC4-204ENST00000509268 FOXD4L6Q3SYB3 417 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-204ENST00000509268 FOXD4L3Q6VB84 417 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-204ENST00000509268 PROCA1Q8NCQ7 364 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-204ENST00000509268 CRISPLD1Q9H336 500 aa6.55□□□□□ -1.36
XRCC4-204ENST00000509268 AVENQ9NQS1 362 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-204ENST00000509268 NEURL1BA8MQ27 555 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 SCTRP47872 440 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 TMEM214Q6NUQ4 689 aaKnown RBP6.54□□□□□ -1.36
XRCC4-204ENST00000509268 XAGE2Q96GT9 111 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 ATP1B4Q9UN42 357 aaPredicted RBP6.54□□□□□ -1.36
XRCC4-204ENST00000509268 HRH3Q9Y5N1 445 aa6.54□□□□□ -1.36
XRCC4-204ENST00000509268 SPDYE3A6NKU9 549 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 IL2RAP01589 272 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 ADH6P28332 368 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 PLVAPQ9BX97 442 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 PCDHB11Q9Y5F2 797 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 PCDHGC4Q9Y5F7 938 aa6.53□□□□□ -1.36
XRCC4-204ENST00000509268 C4orf17Q53FE4 359 aa6.52□□□□□ -1.36
XRCC4-204ENST00000509268 FAM182BQ5T319 152 aa6.52□□□□□ -1.36
XRCC4-204ENST00000509268 DYRK3O43781 588 aa6.52□□□□□ -1.37
XRCC4-204ENST00000509268 TRIM11Q96F44 468 aa6.52□□□□□ -1.37
XRCC4-204ENST00000509268 FHDC1Q9C0D6 1143 aaPredicted RBP6.52□□□□□ -1.37
XRCC4-204ENST00000509268 RAB6BQ9NRW1 208 aa6.52□□□□□ -1.37
XRCC4-204ENST00000509268 FBXO45P0C2W1 286 aa6.51□□□□□ -1.37
XRCC4-204ENST00000509268 NLRP8Q86W28 1048 aa6.51□□□□□ -1.37
XRCC4-204ENST00000509268 TRIM34Q9BYJ4 488 aa6.51□□□□□ -1.37
XRCC4-204ENST00000509268 GOLGA2P5Q9HBQ8 144 aa6.51□□□□□ -1.37
XRCC4-204ENST00000509268 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
XRCC4-204ENST00000509268 APBA3O96018 575 aa6.5□□□□□ -1.37
XRCC4-204ENST00000509268 PRRT3Q5FWE3 981 aa6.5□□□□□ -1.37
XRCC4-204ENST00000509268 ESCO1Q5FWF5 840 aa6.5□□□□□ -1.37
XRCC4-204ENST00000509268 C1orf216Q8TAB5 229 aa6.5□□□□□ -1.37
XRCC4-204ENST00000509268 RHBDD1Q8TEB9 315 aa6.5□□□□□ -1.37
XRCC4-204ENST00000509268 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-204ENST00000509268 MYCP01106 439 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-204ENST00000509268 ZCCHC2Q9C0B9 1178 aaKnown RBP6.49□□□□□ -1.37
XRCC4-204ENST00000509268 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 PPARGC1BQ86YN6 1023 aaKnown RBP6.48□□□□□ -1.37
XRCC4-204ENST00000509268 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 DNAAF2Q9NVR5 837 aaKnown RBP6.48□□□□□ -1.37
XRCC4-204ENST00000509268 KLF15Q9UIH9 416 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 ATXN7O15265 892 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms