RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 CTSOP43234 321 aaPredicted RBP7.62□□□□□ -1.19
CLDND1-212ENST00000506885 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
CLDND1-212ENST00000506885 GPAT2Q6NUI2 795 aa7.62□□□□□ -1.19
CLDND1-212ENST00000506885 KDF1Q8NAX2 398 aaPredicted RBP7.62□□□□□ -1.19
CLDND1-212ENST00000506885 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
CLDND1-212ENST00000506885 ALG2Q9H553 416 aa7.62□□□□□ -1.19
CLDND1-212ENST00000506885 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 FIGNL2A6NMB9 653 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 GLMNQ92990 594 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 PBXIP1Q96AQ6 731 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 OSBPL3Q9H4L5 887 aa7.61□□□□□ -1.19
CLDND1-212ENST00000506885 MEN1O00255 615 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 CSB-PGBD3P0DP91 1061 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 SCTRP47872 440 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 CLN3Q13286 438 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 SND1Q7KZF4 910 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLDND1-212ENST00000506885 LYSMD3Q7Z3D4 306 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
CLDND1-212ENST00000506885 CDCA7Q9BWT1 371 aaPredicted RBP7.59□□□□□ -1.19
CLDND1-212ENST00000506885 IVNS1ABPQ9Y6Y0 642 aa7.59□□□□□ -1.19
CLDND1-212ENST00000506885 PPFIA3O75145 1194 aa7.58□□□□□ -1.2
CLDND1-212ENST00000506885 GTF2E1P29083 439 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-212ENST00000506885 PTSQ03393 145 aa7.58□□□□□ -1.2
CLDND1-212ENST00000506885 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
CLDND1-212ENST00000506885 SLC27A3Q5K4L6 730 aa7.58□□□□□ -1.2
CLDND1-212ENST00000506885 POM121CA8CG34 1229 aa7.57□□□□□ -1.2
CLDND1-212ENST00000506885 EML3Q32P44 896 aa7.57□□□□□ -1.2
CLDND1-212ENST00000506885 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
CLDND1-212ENST00000506885 ESYT1Q9BSJ8 1104 aa7.57□□□□□ -1.2
CLDND1-212ENST00000506885 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
CLDND1-212ENST00000506885 SLC35F4A4IF30 521 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 SKIP12755 728 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 XAGE2Q96GT9 111 aa7.56□□□□□ -1.2
CLDND1-212ENST00000506885 DNMT3AQ9Y6K1 912 aaPredicted RBP7.56□□□□□ -1.2
CLDND1-212ENST00000506885 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
CLDND1-212ENST00000506885 FOXK2Q01167 660 aa7.55□□□□□ -1.2
CLDND1-212ENST00000506885 FAM177A1Q8N128 213 aaPredicted RBP7.55□□□□□ -1.2
CLDND1-212ENST00000506885 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
CLDND1-212ENST00000506885 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
CLDND1-212ENST00000506885 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
CLDND1-212ENST00000506885 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
CLDND1-212ENST00000506885 SPATA31C2B4DYI2 1134 aa7.54□□□□□ -1.2
CLDND1-212ENST00000506885 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
CLDND1-212ENST00000506885 GMCL1Q96IK5 515 aa7.54□□□□□ -1.2
CLDND1-212ENST00000506885 CENPCQ03188 943 aa7.53□□□□□ -1.2
CLDND1-212ENST00000506885 TRIM50Q86XT4 487 aa7.53□□□□□ -1.2
CLDND1-212ENST00000506885 NANOS1Q8WY41 292 aaKnown RBP7.53□□□□□ -1.2
CLDND1-212ENST00000506885 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
CLDND1-212ENST00000506885 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
CLDND1-212ENST00000506885 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
CLDND1-212ENST00000506885 IL2RAP01589 272 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 RFX1P22670 979 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 ITGA6P23229 1130 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 GNASQ5JWF2 1037 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 TAS1R3Q7RTX0 852 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 ZSCAN10Q96SZ4 725 aaPredicted RBP7.52□□□□□ -1.21
CLDND1-212ENST00000506885 RAB6BQ9NRW1 208 aa7.52□□□□□ -1.21
CLDND1-212ENST00000506885 CARNS1A5YM72 827 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 TMEM214Q6NUQ4 689 aaKnown RBP7.51□□□□□ -1.21
CLDND1-212ENST00000506885 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
CLDND1-212ENST00000506885 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 ADAMTS19Q8TE59 1207 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 DYRK1BQ9Y463 629 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 HRH3Q9Y5N1 445 aa7.51□□□□□ -1.21
CLDND1-212ENST00000506885 RBM47A0AV96 593 aaKnown RBP7.5□□□□□ -1.21
CLDND1-212ENST00000506885 H7C1W4 665 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 BACH1O14867 736 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 ATP9BO43861 1147 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 INHAP05111 366 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 GDF10P55107 478 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
CLDND1-212ENST00000506885 POU4F2Q12837 409 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 NCOA4Q13772 614 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 ETNK1Q9HBU6 452 aa7.5□□□□□ -1.21
CLDND1-212ENST00000506885 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
CLDND1-212ENST00000506885 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
CLDND1-212ENST00000506885 FOXR1Q6PIV2 292 aa7.49□□□□□ -1.21
CLDND1-212ENST00000506885 VRTNQ9H8Y1 702 aa7.49□□□□□ -1.21
CLDND1-212ENST00000506885 TIMMDC1Q9NPL8 285 aa7.49□□□□□ -1.21
CLDND1-212ENST00000506885 ADAM23O75077 832 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 RHOQP17081 205 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 GTF2IP78347 998 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 PSME1Q06323 249 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 TLR1Q15399 786 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 PPARGC1BQ86YN6 1023 aaKnown RBP7.48□□□□□ -1.21
CLDND1-212ENST00000506885 RHBDD1Q8TEB9 315 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 CNTNAP3BQ96NU0 1288 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms