RNA–Protein interactions for RNA: ENST00000506836.5

LINC01948-201, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 2 BASIC

Gene LINC01948, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-201ENST00000506836 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01948-201ENST00000506836 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
LINC01948-201ENST00000506836 AMOTQ4VCS5 1084 aa11.31□□□□□ -0.6
LINC01948-201ENST00000506836 C4BP0C0L5 1744 aa11.31□□□□□ -0.6
LINC01948-201ENST00000506836 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
LINC01948-201ENST00000506836 ERVV-2B6SEH9 535 aa11.3□□□□□ -0.6
LINC01948-201ENST00000506836 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
LINC01948-201ENST00000506836 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
LINC01948-201ENST00000506836 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
LINC01948-201ENST00000506836 DCAF5Q96JK2 942 aa11.3□□□□□ -0.6
LINC01948-201ENST00000506836 KDRP35968 1356 aa11.29□□□□□ -0.6
LINC01948-201ENST00000506836 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
LINC01948-201ENST00000506836 PANK3Q9H999 370 aa11.29□□□□□ -0.6
LINC01948-201ENST00000506836 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
LINC01948-201ENST00000506836 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
LINC01948-201ENST00000506836 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
LINC01948-201ENST00000506836 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
LINC01948-201ENST00000506836 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
LINC01948-201ENST00000506836 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
LINC01948-201ENST00000506836 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
LINC01948-201ENST00000506836 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
LINC01948-201ENST00000506836 CHD4Q14839 1912 aa11.27□□□□□ -0.6
LINC01948-201ENST00000506836 CABP4P57796 275 aa11.27□□□□□ -0.61
LINC01948-201ENST00000506836 ITPK1Q13572 414 aa11.27□□□□□ -0.61
LINC01948-201ENST00000506836 ZNF530Q6P9A1 599 aaPredicted RBP11.27□□□□□ -0.61
LINC01948-201ENST00000506836 KNSTRNQ9Y448 316 aa11.27□□□□□ -0.61
LINC01948-201ENST00000506836 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
LINC01948-201ENST00000506836 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
LINC01948-201ENST00000506836 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
LINC01948-201ENST00000506836 AMIGO3Q86WK7 504 aa11.26□□□□□ -0.61
LINC01948-201ENST00000506836 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
LINC01948-201ENST00000506836 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
LINC01948-201ENST00000506836 MMP10P09238 476 aa11.25□□□□□ -0.61
LINC01948-201ENST00000506836 MTHFSP49914 203 aa11.25□□□□□ -0.61
LINC01948-201ENST00000506836 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
LINC01948-201ENST00000506836 ADCY9O60503 1353 aa11.25□□□□□ -0.61
LINC01948-201ENST00000506836 RFC4P35249 363 aa11.24□□□□□ -0.61
LINC01948-201ENST00000506836 TGFB2P61812 414 aa11.24□□□□□ -0.61
LINC01948-201ENST00000506836 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
LINC01948-201ENST00000506836 KDM6AO15550 1401 aaPredicted RBP11.24□□□□□ -0.61
LINC01948-201ENST00000506836 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
LINC01948-201ENST00000506836 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
LINC01948-201ENST00000506836 RPS6KA4O75676 772 aa11.23□□□□□ -0.61
LINC01948-201ENST00000506836 C10orf71Q711Q0 1435 aa11.23□□□□□ -0.61
LINC01948-201ENST00000506836 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
LINC01948-201ENST00000506836 ITGB4P16144 1822 aa11.23□□□□□ -0.61
LINC01948-201ENST00000506836 ZNF831Q5JPB2 1677 aa11.22□□□□□ -0.61
LINC01948-201ENST00000506836 DIEXFQ68CQ4 756 aaKnown RBP11.22□□□□□ -0.61
LINC01948-201ENST00000506836 SULT6B1Q6IMI4 303 aa11.22□□□□□ -0.61
LINC01948-201ENST00000506836 UBR3Q6ZT12 1888 aa11.22□□□□□ -0.61
LINC01948-201ENST00000506836 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
LINC01948-201ENST00000506836 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
LINC01948-201ENST00000506836 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
LINC01948-201ENST00000506836 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
LINC01948-201ENST00000506836 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
LINC01948-201ENST00000506836 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
LINC01948-201ENST00000506836 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
LINC01948-201ENST00000506836 GYS1P13807 737 aa11.2□□□□□ -0.62
LINC01948-201ENST00000506836 IL13P35225 146 aa11.2□□□□□ -0.62
LINC01948-201ENST00000506836 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
LINC01948-201ENST00000506836 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
LINC01948-201ENST00000506836 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
LINC01948-201ENST00000506836 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
LINC01948-201ENST00000506836 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
LINC01948-201ENST00000506836 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
LINC01948-201ENST00000506836 NFATC2IPQ8NCF5 419 aa11.18□□□□□ -0.62
LINC01948-201ENST00000506836 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
LINC01948-201ENST00000506836 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
LINC01948-201ENST00000506836 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
LINC01948-201ENST00000506836 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
LINC01948-201ENST00000506836 FCHSD2O94868 740 aa11.17□□□□□ -0.62
LINC01948-201ENST00000506836 DSG3P32926 999 aa11.17□□□□□ -0.62
LINC01948-201ENST00000506836 MRC1P22897 1456 aa11.17□□□□□ -0.62
LINC01948-201ENST00000506836 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 ZPR1O75312 459 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 DPEP1P16444 411 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 HSPA6P17066 643 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
LINC01948-201ENST00000506836 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
LINC01948-201ENST00000506836 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
LINC01948-201ENST00000506836 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
LINC01948-201ENST00000506836 CAPN15O75808 1086 aa11.15□□□□□ -0.62
LINC01948-201ENST00000506836 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
LINC01948-201ENST00000506836 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
LINC01948-201ENST00000506836 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
LINC01948-201ENST00000506836 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.63
LINC01948-201ENST00000506836 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
LINC01948-201ENST00000506836 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
LINC01948-201ENST00000506836 FKBP8Q14318 412 aa11.14□□□□□ -0.63
LINC01948-201ENST00000506836 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
LINC01948-201ENST00000506836 HMOX1P09601 288 aa11.13□□□□□ -0.63
LINC01948-201ENST00000506836 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
LINC01948-201ENST00000506836 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
LINC01948-201ENST00000506836 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
LINC01948-201ENST00000506836 SRP68Q9UHB9 627 aaKnown RBP11.13□□□□□ -0.63
LINC01948-201ENST00000506836 COL15A1P39059 1388 aa11.13□□□□□ -0.63
LINC01948-201ENST00000506836 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
LINC01948-201ENST00000506836 A0A087WZG4 1122 aa11.12□□□□□ -0.63
LINC01948-201ENST00000506836 POLRMTO00411 1230 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms