RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 DZIP3Q86Y13 1208 aaKnown RBP6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 PGBD3Q8N328 593 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 A0A1W2PRU2 124 aa6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 NEURL1BA8MQ27 555 aa6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 SPATA31C2B4DYI2 1134 aa6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 HYAL3O43820 417 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 FGFR3P22607 806 aa6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 LBRQ14739 615 aaKnown RBP6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 PLVAPQ9BX97 442 aa6.11□□□□□ -1.43
HMGB3P17-201ENST00000504195 ARAFP10398 606 aa6.1□□□□□ -1.43
HMGB3P17-201ENST00000504195 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
HMGB3P17-201ENST00000504195 LILRB3O75022 631 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 EFHC2Q5JST6 749 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 BARGINQ6ZT62 677 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 SEPT12Q8IYM1 358 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 ABHD17AQ96GS6 310 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
HMGB3P17-201ENST00000504195 A0A1B0GTH6 734 aa6.08□□□□□ -1.44
HMGB3P17-201ENST00000504195 C2CD2LO14523 706 aa6.08□□□□□ -1.44
HMGB3P17-201ENST00000504195 THBS1P07996 1170 aa6.08□□□□□ -1.44
HMGB3P17-201ENST00000504195 TRIM11Q96F44 468 aa6.08□□□□□ -1.44
HMGB3P17-201ENST00000504195 NACC1Q96RE7 527 aa6.08□□□□□ -1.44
HMGB3P17-201ENST00000504195 PPP2R2DQ66LE6 453 aa6.07□□□□□ -1.44
HMGB3P17-201ENST00000504195 LIMD1Q9UGP4 676 aa6.07□□□□□ -1.44
HMGB3P17-201ENST00000504195 ESPNB1AK53 854 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 ADH6P28332 368 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 CTBSQ01459 385 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 CLN3Q13286 438 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 CYP2U1Q7Z449 544 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 PNMA1Q8ND90 353 aa6.06□□□□□ -1.44
HMGB3P17-201ENST00000504195 ZMYND10O75800 440 aa6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 GTF2E1P29083 439 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 FZD5Q13467 585 aa6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 RTL5Q5HYW3 569 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 OCSTAMPQ9BR26 566 aa6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 RUBCNLQ9H714 662 aa6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P17-201ENST00000504195 H2AFB1P0C5Y9 115 aa6.04□□□□□ -1.44
HMGB3P17-201ENST00000504195 H2AFB2P0C5Z0 115 aa6.04□□□□□ -1.44
HMGB3P17-201ENST00000504195 ELNP15502 786 aa6.04□□□□□ -1.44
HMGB3P17-201ENST00000504195 PHKA2P46019 1235 aa6.04□□□□□ -1.44
HMGB3P17-201ENST00000504195 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
HMGB3P17-201ENST00000504195 COL17A1Q9UMD9 1497 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 CTDSPL2Q05D32 466 aa6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 UBAP2LQ14157 1087 aaKnown RBP6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 NR6A1Q15406 480 aa6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 MYSM1Q5VVJ2 828 aa6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 CC2D2BQ6DHV5 1058 aa6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 PARP9Q8IXQ6 854 aa6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
HMGB3P17-201ENST00000504195 BNIP3LO60238 219 aa6.02□□□□□ -1.45
HMGB3P17-201ENST00000504195 GNASQ5JWF2 1037 aa6.02□□□□□ -1.45
HMGB3P17-201ENST00000504195 FMNL2Q96PY5 1086 aa6.02□□□□□ -1.45
HMGB3P17-201ENST00000504195 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
HMGB3P17-201ENST00000504195 FIGNL1Q6PIW4 674 aa6.01□□□□□ -1.45
HMGB3P17-201ENST00000504195 LRRN4Q8WUT4 740 aa6.01□□□□□ -1.45
HMGB3P17-201ENST00000504195 HAP1P54257 671 aaPredicted RBP6□□□□□ -1.45
HMGB3P17-201ENST00000504195 AVENQ9NQS1 362 aaPredicted RBP6□□□□□ -1.45
HMGB3P17-201ENST00000504195 NDFIP2Q9NV92 336 aa6□□□□□ -1.45
HMGB3P17-201ENST00000504195 CLK2P49760 499 aaKnown RBP5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 ERVK-9P63128 1117 aa5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 FCHSD1Q86WN1 690 aa5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 CCDC125Q86Z20 511 aa5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 ZSCAN10Q96SZ4 725 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 RSPH6AQ9H0K4 717 aa5.99□□□□□ -1.45
HMGB3P17-201ENST00000504195 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 ALAS2P22557 587 aa5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 MSX1P28360 303 aa5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 IRAK1P51617 712 aa5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 TMEM214Q6NUQ4 689 aaKnown RBP5.98□□□□□ -1.45
HMGB3P17-201ENST00000504195 TRIM66O15016 1216 aa5.97□□□□□ -1.45
HMGB3P17-201ENST00000504195 RAB6BQ9NRW1 208 aa5.97□□□□□ -1.45
HMGB3P17-201ENST00000504195 PCMTD2Q9NV79 361 aa5.97□□□□□ -1.45
HMGB3P17-201ENST00000504195 C9orf172C9J069 976 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 VSIG10Q8N0Z9 540 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 CNKSR1Q969H4 720 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 AK7Q96M32 723 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 CRISPLD1Q9H336 500 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 PRR12Q9ULL5 1215 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 RNF114Q9Y508 228 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 PCDHGC4Q9Y5F7 938 aa5.96□□□□□ -1.46
HMGB3P17-201ENST00000504195 GIGYF1O75420 1035 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 CENPCQ03188 943 aa5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 RNF20Q5VTR2 975 aa5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 ZC3H15Q8WU90 426 aaKnown RBP5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 TP53INP1Q96A56 240 aa5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 ESYT1Q9BSJ8 1104 aa5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
HMGB3P17-201ENST00000504195 DCDC2BA2VCK2 349 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 CD33P20138 364 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 PCBP4P57723 403 aaKnown RBP5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 GRIK4Q16099 956 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 C4orf17Q53FE4 359 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 FAM182BQ5T319 152 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 KLF15Q9UIH9 416 aa5.94□□□□□ -1.46
HMGB3P17-201ENST00000504195 PCDHB9Q9Y5E1 797 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms