RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
SNX13-210ENST00000494402 DDX56Q9NY93 547 aaKnown RBP9.13□□□□□ -0.95
SNX13-210ENST00000494402 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
SNX13-210ENST00000494402 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
SNX13-210ENST00000494402 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
SNX13-210ENST00000494402 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
SNX13-210ENST00000494402 PTCD1O75127 700 aaKnown RBP9.12□□□□□ -0.95
SNX13-210ENST00000494402 FAM13AO94988 1023 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 MAPK8P45983 427 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 ATP2B2Q01814 1243 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 RPUSD2Q8IZ73 545 aaKnown RBP9.12□□□□□ -0.95
SNX13-210ENST00000494402 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 G3BP2Q9UN86 482 aaKnown RBP9.12□□□□□ -0.95
SNX13-210ENST00000494402 PRKAB1Q9Y478 270 aa9.12□□□□□ -0.95
SNX13-210ENST00000494402 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
SNX13-210ENST00000494402 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
SNX13-210ENST00000494402 CITED4Q96RK1 184 aa9.11□□□□□ -0.95
SNX13-210ENST00000494402 MKNK1Q9BUB5 465 aa9.11□□□□□ -0.95
SNX13-210ENST00000494402 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
SNX13-210ENST00000494402 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
SNX13-210ENST00000494402 DKK1O94907 266 aa9.1□□□□□ -0.95
SNX13-210ENST00000494402 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
SNX13-210ENST00000494402 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
SNX13-210ENST00000494402 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
SNX13-210ENST00000494402 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
SNX13-210ENST00000494402 FGRP09769 529 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 PTPREP23469 700 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 DSC3Q14574 896 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 GRIPAP1Q4V328 841 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
SNX13-210ENST00000494402 CKAP2LQ8IYA6 745 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 HELQQ8TDG4 1101 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNX13-210ENST00000494402 PCGF6Q9BYE7 350 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 CHIC2Q9UKJ5 165 aa9.09□□□□□ -0.95
SNX13-210ENST00000494402 A0A0U1RQG5 324 aaPredicted RBP9.08□□□□□ -0.96
SNX13-210ENST00000494402 NPR3P17342 541 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 TBX4P57082 545 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 EHHADHQ08426 723 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 NBPF6Q5VWK0 638 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
SNX13-210ENST00000494402 NBPF4Q96M43 638 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 DMRTB1Q96MA1 342 aa9.08□□□□□ -0.96
SNX13-210ENST00000494402 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
SNX13-210ENST00000494402 FMNL3Q8IVF7 1028 aa9.07□□□□□ -0.96
SNX13-210ENST00000494402 MKL1Q969V6 931 aa9.07□□□□□ -0.96
SNX13-210ENST00000494402 PLCD4Q9BRC7 762 aa9.07□□□□□ -0.96
SNX13-210ENST00000494402 SLKQ9H2G2 1235 aaPredicted RBP9.07□□□□□ -0.96
SNX13-210ENST00000494402 TYW1Q9NV66 732 aaKnown RBP9.07□□□□□ -0.96
SNX13-210ENST00000494402 GEMIN8Q9NWZ8 242 aaKnown RBP9.07□□□□□ -0.96
SNX13-210ENST00000494402 KIAA1024Q9UPX6 916 aa9.07□□□□□ -0.96
SNX13-210ENST00000494402 LAS1LQ9Y4W2 734 aaKnown RBP9.07□□□□□ -0.96
SNX13-210ENST00000494402 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
SNX13-210ENST00000494402 PRC1O43663 620 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 SH3BP5O60239 455 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 PPFIA4O75335 1185 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 BIRC2Q13490 618 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 DESI1Q6ICB0 168 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 TRAF7Q6Q0C0 670 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 COL26A1Q96A83 441 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
SNX13-210ENST00000494402 COL9A1P20849 921 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 RHBDL3P58872 404 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
SNX13-210ENST00000494402 LONRF3Q496Y0 759 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 PLEKHG4Q58EX7 1191 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 CCDC102BQ68D86 513 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 USP48Q86UV5 1035 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 STAG1Q8WVM7 1258 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 FRMD6Q96NE9 622 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 HINFPQ9BQA5 517 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 ERBB3P21860 1342 aa9.05□□□□□ -0.96
SNX13-210ENST00000494402 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 PDGFRBP09619 1106 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 PTMSP20962 102 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 RACK1P63244 317 aaKnown RBP9.04□□□□□ -0.96
SNX13-210ENST00000494402 GTF2IP78347 998 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 PRPF38AQ8NAV1 312 aaKnown RBP9.04□□□□□ -0.96
SNX13-210ENST00000494402 TATDN2Q93075 761 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 EVI5LQ96CN4 794 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 CRELD1Q96HD1 420 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 SGSM3Q96HU1 749 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
SNX13-210ENST00000494402 WEE1P30291 646 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 APLP1P51693 650 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
SNX13-210ENST00000494402 SERINC3Q13530 473 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 C4orf46Q504U0 113 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 TSKSQ9UJT2 592 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms