RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TRIM52Q96A61 297 aa8.12□□□□□ -1.11
SNRNP27-204ENST00000487029 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
SNRNP27-204ENST00000487029 CENPCQ03188 943 aa8.11□□□□□ -1.11
SNRNP27-204ENST00000487029 LINC00114Q6XXX2 140 aa8.11□□□□□ -1.11
SNRNP27-204ENST00000487029 EDARADDQ8WWZ3 215 aa8.11□□□□□ -1.11
SNRNP27-204ENST00000487029 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
SNRNP27-204ENST00000487029 MKL2Q9ULH7 1088 aa8.11□□□□□ -1.11
SNRNP27-204ENST00000487029 RNF20Q5VTR2 975 aa8.1□□□□□ -1.11
SNRNP27-204ENST00000487029 CNKSR1Q969H4 720 aa8.1□□□□□ -1.11
SNRNP27-204ENST00000487029 HRH3Q9Y5N1 445 aa8.1□□□□□ -1.11
SNRNP27-204ENST00000487029 GPR37L1O60883 481 aa8.09□□□□□ -1.11
SNRNP27-204ENST00000487029 CCDC125Q86Z20 511 aa8.09□□□□□ -1.11
SNRNP27-204ENST00000487029 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
SNRNP27-204ENST00000487029 RUBCNLQ9H714 662 aa8.09□□□□□ -1.11
SNRNP27-204ENST00000487029 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
SNRNP27-204ENST00000487029 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 ITGB7P26010 798 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 CTBSQ01459 385 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 NR1H3Q13133 447 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 GRIN2CQ14957 1233 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 ABHD17AQ96GS6 310 aa8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 FHDC1Q9C0D6 1143 aaPredicted RBP8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 GDF2Q9UK05 429 aaPredicted RBP8.07□□□□□ -1.12
SNRNP27-204ENST00000487029 A0A1B0GTH6 734 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 C1QTNF9BB2RNN3 333 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 STAU1O95793 577 aaKnown RBP8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 GNRH1P01148 92 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 C4orf17Q53FE4 359 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 GGA1Q9UJY5 639 aa8.06□□□□□ -1.12
SNRNP27-204ENST00000487029 BNIP3LO60238 219 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 MSX1P28360 303 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 CD163Q86VB7 1156 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 PHF24Q9UPV7 400 aa8.05□□□□□ -1.12
SNRNP27-204ENST00000487029 ALYREFQ86V81 257 aaKnown RBP8.04□□□□□ -1.12
SNRNP27-204ENST00000487029 GOLGA6L1Q8N7Z2 621 aa8.04□□□□□ -1.12
SNRNP27-204ENST00000487029 BMP4P12644 408 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 AMPD1P23109 780 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 CHRNA4P43681 627 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 TSGA10IPQ3SY00 556 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 SLCO4C1Q6ZQN7 724 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 BTBD6Q96KE9 485 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 HCN2Q9UL51 889 aa8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
SNRNP27-204ENST00000487029 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 FGFR3P22607 806 aa8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 MCCD1P59942 119 aaPredicted RBP8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 TMEM214Q6NUQ4 689 aaKnown RBP8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 PCMTD1Q96MG8 357 aaPredicted RBP8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 GOPCQ9HD26 462 aa8.02□□□□□ -1.13
SNRNP27-204ENST00000487029 CSB-PGBD3P0DP91 1061 aa8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 EPXP11678 715 aa8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 DGKGP49619 791 aa8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 LBRQ14739 615 aaKnown RBP8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 PGBD3Q8N328 593 aa8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
SNRNP27-204ENST00000487029 GNB5O14775 395 aa8□□□□□ -1.13
SNRNP27-204ENST00000487029 GNASQ5JWF2 1037 aa8□□□□□ -1.13
SNRNP27-204ENST00000487029 DNAAF2Q9NVR5 837 aaKnown RBP8□□□□□ -1.13
SNRNP27-204ENST00000487029 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
SNRNP27-204ENST00000487029 NEURL1BA8MQ27 555 aa7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 PRKCSHP14314 528 aaPredicted RBP7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 EFHC2Q5JST6 749 aa7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 RNF135Q8IUD6 432 aa7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 ETNK1Q9HBU6 452 aa7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
SNRNP27-204ENST00000487029 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
SNRNP27-204ENST00000487029 MTMR14Q8NCE2 650 aa7.98□□□□□ -1.13
SNRNP27-204ENST00000487029 CRISPLD1Q9H336 500 aa7.98□□□□□ -1.13
SNRNP27-204ENST00000487029 MYCP01106 439 aaPredicted RBP7.97□□□□□ -1.13
SNRNP27-204ENST00000487029 ARAFP10398 606 aa7.97□□□□□ -1.13
SNRNP27-204ENST00000487029 DOC2BQ14184 412 aa7.97□□□□□ -1.13
SNRNP27-204ENST00000487029 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
SNRNP27-204ENST00000487029 RHBDD1Q8TEB9 315 aa7.97□□□□□ -1.13
SNRNP27-204ENST00000487029 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
SNRNP27-204ENST00000487029 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
SNRNP27-204ENST00000487029 ATP4AP20648 1035 aa7.95□□□□□ -1.14
SNRNP27-204ENST00000487029 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
SNRNP27-204ENST00000487029 IL27Q8NEV9 243 aa7.95□□□□□ -1.14
SNRNP27-204ENST00000487029 SEMA6BQ9H3T3 888 aa7.95□□□□□ -1.14
SNRNP27-204ENST00000487029 SNRKQ9NRH2 765 aa7.95□□□□□ -1.14
SNRNP27-204ENST00000487029 PLA2G4AP47712 749 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 TLR1Q15399 786 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 ESCO1Q5FWF5 840 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 CHSY3Q70JA7 882 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 FCHSD1Q86WN1 690 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 PHTF2Q8N3S3 785 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 ZNF592Q92610 1267 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 PCDHGC4Q9Y5F7 938 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 NDUFB9Q9Y6M9 179 aa7.94□□□□□ -1.14
SNRNP27-204ENST00000487029 CD33P20138 364 aa7.93□□□□□ -1.14
SNRNP27-204ENST00000487029 TRIM11Q96F44 468 aa7.93□□□□□ -1.14
SNRNP27-204ENST00000487029 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
SNRNP27-204ENST00000487029 DCDC2BA2VCK2 349 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms