RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
SNRNP27-204ENST00000487029 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
SNRNP27-204ENST00000487029 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
SNRNP27-204ENST00000487029 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
SNRNP27-204ENST00000487029 FOXD1Q16676 465 aa20.97■□□□□ 0.95
SNRNP27-204ENST00000487029 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
SNRNP27-204ENST00000487029 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
SNRNP27-204ENST00000487029 MSH5O43196 834 aa19.57■□□□□ 0.72
SNRNP27-204ENST00000487029 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
SNRNP27-204ENST00000487029 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
SNRNP27-204ENST00000487029 ADRA2BP18089 450 aa19.41■□□□□ 0.7
SNRNP27-204ENST00000487029 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
SNRNP27-204ENST00000487029 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
SNRNP27-204ENST00000487029 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
SNRNP27-204ENST00000487029 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
SNRNP27-204ENST00000487029 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
SNRNP27-204ENST00000487029 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
SNRNP27-204ENST00000487029 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
SNRNP27-204ENST00000487029 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
SNRNP27-204ENST00000487029 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
SNRNP27-204ENST00000487029 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
SNRNP27-204ENST00000487029 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
SNRNP27-204ENST00000487029 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
SNRNP27-204ENST00000487029 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
SNRNP27-204ENST00000487029 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
SNRNP27-204ENST00000487029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNRNP27-204ENST00000487029 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
SNRNP27-204ENST00000487029 KCNA4P22459 653 aa15.82■□□□□ 0.12
SNRNP27-204ENST00000487029 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
SNRNP27-204ENST00000487029 CAPN15O75808 1086 aa15.64■□□□□ 0.09
SNRNP27-204ENST00000487029 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
SNRNP27-204ENST00000487029 DSG3P32926 999 aa15.63■□□□□ 0.09
SNRNP27-204ENST00000487029 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
SNRNP27-204ENST00000487029 ABCB7O75027 752 aa15.33■□□□□ 0.04
SNRNP27-204ENST00000487029 POTEHQ6S545 545 aa15.27■□□□□ 0.04
SNRNP27-204ENST00000487029 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
SNRNP27-204ENST00000487029 APLP2Q06481 763 aa15.22■□□□□ 0.03
SNRNP27-204ENST00000487029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
SNRNP27-204ENST00000487029 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
SNRNP27-204ENST00000487029 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
SNRNP27-204ENST00000487029 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
SNRNP27-204ENST00000487029 POLA2Q14181 598 aa14.92□□□□□ -0.02
SNRNP27-204ENST00000487029 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
SNRNP27-204ENST00000487029 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
SNRNP27-204ENST00000487029 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
SNRNP27-204ENST00000487029 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
SNRNP27-204ENST00000487029 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
SNRNP27-204ENST00000487029 ZBTB22O15209 634 aa14.6□□□□□ -0.07
SNRNP27-204ENST00000487029 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
SNRNP27-204ENST00000487029 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
SNRNP27-204ENST00000487029 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
SNRNP27-204ENST00000487029 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
SNRNP27-204ENST00000487029 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
SNRNP27-204ENST00000487029 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
SNRNP27-204ENST00000487029 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
SNRNP27-204ENST00000487029 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
SNRNP27-204ENST00000487029 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNRNP27-204ENST00000487029 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
SNRNP27-204ENST00000487029 SPDYE2BA6NHP3 402 aa14.06□□□□□ -0.16
SNRNP27-204ENST00000487029 SPDYE6P0CI01 402 aa14.06□□□□□ -0.16
SNRNP27-204ENST00000487029 FBLN2P98095 1184 aa14.06□□□□□ -0.16
SNRNP27-204ENST00000487029 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
SNRNP27-204ENST00000487029 HAX1O00165 279 aa14.05□□□□□ -0.16
SNRNP27-204ENST00000487029 EVX2Q03828 476 aa13.99□□□□□ -0.17
SNRNP27-204ENST00000487029 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
SNRNP27-204ENST00000487029 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
SNRNP27-204ENST00000487029 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
SNRNP27-204ENST00000487029 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
SNRNP27-204ENST00000487029 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
SNRNP27-204ENST00000487029 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
SNRNP27-204ENST00000487029 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
SNRNP27-204ENST00000487029 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNRNP27-204ENST00000487029 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
SNRNP27-204ENST00000487029 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
SNRNP27-204ENST00000487029 GABBR2O75899 941 aa13.57□□□□□ -0.24
SNRNP27-204ENST00000487029 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
SNRNP27-204ENST00000487029 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
SNRNP27-204ENST00000487029 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
SNRNP27-204ENST00000487029 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
SNRNP27-204ENST00000487029 LHX8Q68G74 356 aa13.32□□□□□ -0.28
SNRNP27-204ENST00000487029 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
SNRNP27-204ENST00000487029 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SNRNP27-204ENST00000487029 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
SNRNP27-204ENST00000487029 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
SNRNP27-204ENST00000487029 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
SNRNP27-204ENST00000487029 CLCN6P51797 869 aa13.13□□□□□ -0.31
SNRNP27-204ENST00000487029 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
SNRNP27-204ENST00000487029 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
SNRNP27-204ENST00000487029 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
SNRNP27-204ENST00000487029 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
SNRNP27-204ENST00000487029 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
SNRNP27-204ENST00000487029 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNRNP27-204ENST00000487029 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
SNRNP27-204ENST00000487029 PROM2Q8N271 834 aa12.92□□□□□ -0.34
SNRNP27-204ENST00000487029 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
SNRNP27-204ENST00000487029 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
SNRNP27-204ENST00000487029 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
SNRNP27-204ENST00000487029 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
SNRNP27-204ENST00000487029 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
SNRNP27-204ENST00000487029 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms