RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 NR1H3Q13133 447 aa8.63□□□□□ -1.03
SPTA1-207ENST00000485680 RIPOR1Q6ZS17 1223 aa8.63□□□□□ -1.03
SPTA1-207ENST00000485680 GTPBP3Q969Y2 492 aaKnown RBP8.63□□□□□ -1.03
SPTA1-207ENST00000485680 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
SPTA1-207ENST00000485680 ESPNB1AK53 854 aa8.62□□□□□ -1.03
SPTA1-207ENST00000485680 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
SPTA1-207ENST00000485680 OIP5O43482 229 aa8.61□□□□□ -1.03
SPTA1-207ENST00000485680 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
SPTA1-207ENST00000485680 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
SPTA1-207ENST00000485680 DYRK1BQ9Y463 629 aa8.61□□□□□ -1.03
SPTA1-207ENST00000485680 H7C1W4 665 aa8.6□□□□□ -1.03
SPTA1-207ENST00000485680 UCN2Q96RP3 112 aa8.6□□□□□ -1.03
SPTA1-207ENST00000485680 FURINP09958 794 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 MX2P20592 715 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 GPC1P35052 558 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
SPTA1-207ENST00000485680 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 CYLDQ9NQC7 956 aa8.59□□□□□ -1.03
SPTA1-207ENST00000485680 SOX11P35716 441 aa8.58□□□□□ -1.04
SPTA1-207ENST00000485680 EIF4G2P78344 907 aaKnown RBP eCLIP8.58□□□□□ -1.047e-19■■■□□ 15.3
SPTA1-207ENST00000485680 GAS2L1Q99501 681 aaPredicted RBP8.58□□□□□ -1.04
SPTA1-207ENST00000485680 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SPTA1-207ENST00000485680 COL8A1P27658 744 aa8.57□□□□□ -1.04
SPTA1-207ENST00000485680 POU4F2Q12837 409 aa8.57□□□□□ -1.04
SPTA1-207ENST00000485680 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
SPTA1-207ENST00000485680 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
SPTA1-207ENST00000485680 RFX1P22670 979 aa8.56□□□□□ -1.04
SPTA1-207ENST00000485680 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
SPTA1-207ENST00000485680 PPP1R12CQ9BZL4 782 aa8.56□□□□□ -1.04
SPTA1-207ENST00000485680 A0A1W2PRU2 124 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-207ENST00000485680 SHISA8B8ZZ34 492 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 MEN1O00255 615 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 PIK3CDO00329 1044 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-207ENST00000485680 ALYREFQ86V81 257 aaKnown RBP8.55□□□□□ -1.04
SPTA1-207ENST00000485680 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 OXCT2Q9BYC2 517 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-207ENST00000485680 PCDHB9Q9Y5E1 797 aa8.55□□□□□ -1.04
SPTA1-207ENST00000485680 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
SPTA1-207ENST00000485680 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
SPTA1-207ENST00000485680 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
SPTA1-207ENST00000485680 GRIP2Q9C0E4 1043 aa8.54□□□□□ -1.04
SPTA1-207ENST00000485680 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
SPTA1-207ENST00000485680 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
SPTA1-207ENST00000485680 MAP2K3P46734 347 aa8.53□□□□□ -1.04
SPTA1-207ENST00000485680 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
SPTA1-207ENST00000485680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
SPTA1-207ENST00000485680 THBS1P07996 1170 aa8.52□□□□□ -1.05
SPTA1-207ENST00000485680 LMOD1P29536 600 aaPredicted RBP8.52□□□□□ -1.05
SPTA1-207ENST00000485680 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
SPTA1-207ENST00000485680 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
SPTA1-207ENST00000485680 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.05
SPTA1-207ENST00000485680 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
SPTA1-207ENST00000485680 KLRG1Q96E93 195 aa8.51□□□□□ -1.05
SPTA1-207ENST00000485680 MAFBQ9Y5Q3 323 aaPredicted RBP8.51□□□□□ -1.05
SPTA1-207ENST00000485680 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
SPTA1-207ENST00000485680 F11P03951 625 aa8.5□□□□□ -1.05
SPTA1-207ENST00000485680 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-207ENST00000485680 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
SPTA1-207ENST00000485680 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
SPTA1-207ENST00000485680 ATP9BO43861 1147 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
SPTA1-207ENST00000485680 EDARADDQ8WWZ3 215 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 PBXIP1Q96AQ6 731 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 SUV39H2Q9H5I1 410 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
SPTA1-207ENST00000485680 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
SPTA1-207ENST00000485680 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
SPTA1-207ENST00000485680 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
SPTA1-207ENST00000485680 C1QTNF9BB2RNN3 333 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 SKIP12755 728 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 ITGB7P26010 798 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 ERVK-9P63128 1117 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 CLN3Q13286 438 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
SPTA1-207ENST00000485680 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
SPTA1-207ENST00000485680 PPP1R15AO75807 674 aaPredicted RBP8.46□□□□□ -1.06
SPTA1-207ENST00000485680 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 CC2D2BQ6DHV5 1058 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 RNF135Q8IUD6 432 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 PHTF2Q8N3S3 785 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 RETREG2Q8NC44 543 aa8.46□□□□□ -1.06
SPTA1-207ENST00000485680 USP17L5A8MUK1 530 aa8.45□□□□□ -1.06
SPTA1-207ENST00000485680 WASLO00401 505 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-207ENST00000485680 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-207ENST00000485680 UBAP2LQ14157 1087 aaKnown RBP8.45□□□□□ -1.06
SPTA1-207ENST00000485680 TSGA10IPQ3SY00 556 aa8.45□□□□□ -1.06
SPTA1-207ENST00000485680 TAS1R3Q7RTX0 852 aa8.45□□□□□ -1.06
SPTA1-207ENST00000485680 CD163Q86VB7 1156 aa8.45□□□□□ -1.06
SPTA1-207ENST00000485680 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
SPTA1-207ENST00000485680 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
SPTA1-207ENST00000485680 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
SPTA1-207ENST00000485680 USP17L2Q6R6M4 530 aa8.44□□□□□ -1.06
SPTA1-207ENST00000485680 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
SPTA1-207ENST00000485680 CCDC125Q86Z20 511 aa8.44□□□□□ -1.06
SPTA1-207ENST00000485680 ZNF592Q92610 1267 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1453.8 ms