RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
SPTA1-207ENST00000485680 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
SPTA1-207ENST00000485680 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
SPTA1-207ENST00000485680 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
SPTA1-207ENST00000485680 FOXD1Q16676 465 aa22.22■■□□□ 1.15
SPTA1-207ENST00000485680 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
SPTA1-207ENST00000485680 MSH5O43196 834 aa20.89■□□□□ 0.93
SPTA1-207ENST00000485680 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
SPTA1-207ENST00000485680 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
SPTA1-207ENST00000485680 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
SPTA1-207ENST00000485680 ADRA2BP18089 450 aa20.42■□□□□ 0.86
SPTA1-207ENST00000485680 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
SPTA1-207ENST00000485680 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
SPTA1-207ENST00000485680 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
SPTA1-207ENST00000485680 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
SPTA1-207ENST00000485680 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
SPTA1-207ENST00000485680 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
SPTA1-207ENST00000485680 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
SPTA1-207ENST00000485680 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
SPTA1-207ENST00000485680 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
SPTA1-207ENST00000485680 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
SPTA1-207ENST00000485680 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
SPTA1-207ENST00000485680 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
SPTA1-207ENST00000485680 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
SPTA1-207ENST00000485680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
SPTA1-207ENST00000485680 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
SPTA1-207ENST00000485680 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
SPTA1-207ENST00000485680 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
SPTA1-207ENST00000485680 DSG3P32926 999 aa16.57■□□□□ 0.24
SPTA1-207ENST00000485680 CAPN15O75808 1086 aa16.54■□□□□ 0.24
SPTA1-207ENST00000485680 POTEHQ6S545 545 aa16.41■□□□□ 0.22
SPTA1-207ENST00000485680 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
SPTA1-207ENST00000485680 KCNA4P22459 653 aa16.36■□□□□ 0.21
SPTA1-207ENST00000485680 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
SPTA1-207ENST00000485680 APLP2Q06481 763 aa16.15■□□□□ 0.18
SPTA1-207ENST00000485680 ABCB7O75027 752 aa16.14■□□□□ 0.17
SPTA1-207ENST00000485680 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SPTA1-207ENST00000485680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
SPTA1-207ENST00000485680 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
SPTA1-207ENST00000485680 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
SPTA1-207ENST00000485680 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
SPTA1-207ENST00000485680 POLA2Q14181 598 aa15.71■□□□□ 0.11
SPTA1-207ENST00000485680 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
SPTA1-207ENST00000485680 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
SPTA1-207ENST00000485680 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
SPTA1-207ENST00000485680 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
SPTA1-207ENST00000485680 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
SPTA1-207ENST00000485680 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
SPTA1-207ENST00000485680 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
SPTA1-207ENST00000485680 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
SPTA1-207ENST00000485680 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
SPTA1-207ENST00000485680 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
SPTA1-207ENST00000485680 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
SPTA1-207ENST00000485680 PITPNM1O00562 1244 aa15.07■□□□□ 0
SPTA1-207ENST00000485680 ZBTB22O15209 634 aa15.05■□□□□ -0
SPTA1-207ENST00000485680 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
SPTA1-207ENST00000485680 HAX1O00165 279 aa14.97□□□□□ -0.01
SPTA1-207ENST00000485680 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
SPTA1-207ENST00000485680 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
SPTA1-207ENST00000485680 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
SPTA1-207ENST00000485680 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
SPTA1-207ENST00000485680 EVX2Q03828 476 aa14.82□□□□□ -0.04
SPTA1-207ENST00000485680 FBLN2P98095 1184 aa14.77□□□□□ -0.05
SPTA1-207ENST00000485680 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
SPTA1-207ENST00000485680 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
SPTA1-207ENST00000485680 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
SPTA1-207ENST00000485680 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
SPTA1-207ENST00000485680 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
SPTA1-207ENST00000485680 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
SPTA1-207ENST00000485680 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
SPTA1-207ENST00000485680 GABBR2O75899 941 aa14.44□□□□□ -0.1
SPTA1-207ENST00000485680 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
SPTA1-207ENST00000485680 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
SPTA1-207ENST00000485680 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
SPTA1-207ENST00000485680 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTA1-207ENST00000485680 LHX8Q68G74 356 aa14.27□□□□□ -0.13
SPTA1-207ENST00000485680 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
SPTA1-207ENST00000485680 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
SPTA1-207ENST00000485680 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
SPTA1-207ENST00000485680 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
SPTA1-207ENST00000485680 CLCN6P51797 869 aa14.05□□□□□ -0.16
SPTA1-207ENST00000485680 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
SPTA1-207ENST00000485680 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
SPTA1-207ENST00000485680 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
SPTA1-207ENST00000485680 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
SPTA1-207ENST00000485680 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
SPTA1-207ENST00000485680 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
SPTA1-207ENST00000485680 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
SPTA1-207ENST00000485680 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
SPTA1-207ENST00000485680 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
SPTA1-207ENST00000485680 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
SPTA1-207ENST00000485680 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
SPTA1-207ENST00000485680 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
SPTA1-207ENST00000485680 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPTA1-207ENST00000485680 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
SPTA1-207ENST00000485680 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
SPTA1-207ENST00000485680 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
SPTA1-207ENST00000485680 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
SPTA1-207ENST00000485680 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
SPTA1-207ENST00000485680 METRNQ9UJH8 293 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms