RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
SNX5-208ENST00000475716 UBR3Q6ZT12 1888 aa14.07□□□□□ -0.16
SNX5-208ENST00000475716 CICQ96RK0 1608 aaPredicted RBP14.07□□□□□ -0.16
SNX5-208ENST00000475716 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
SNX5-208ENST00000475716 NLGN1Q8N2Q7 840 aa14.06□□□□□ -0.16
SNX5-208ENST00000475716 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
SNX5-208ENST00000475716 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
SNX5-208ENST00000475716 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
SNX5-208ENST00000475716 INSRP06213 1382 aa14.06□□□□□ -0.16
SNX5-208ENST00000475716 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
SNX5-208ENST00000475716 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
SNX5-208ENST00000475716 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
SNX5-208ENST00000475716 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
SNX5-208ENST00000475716 GYS1P13807 737 aa14.04□□□□□ -0.16
SNX5-208ENST00000475716 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
SNX5-208ENST00000475716 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
SNX5-208ENST00000475716 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SNX5-208ENST00000475716 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
SNX5-208ENST00000475716 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
SNX5-208ENST00000475716 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
SNX5-208ENST00000475716 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
SNX5-208ENST00000475716 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
SNX5-208ENST00000475716 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
SNX5-208ENST00000475716 ITGB4P16144 1822 aa14.02□□□□□ -0.16
SNX5-208ENST00000475716 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.16
SNX5-208ENST00000475716 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.16
SNX5-208ENST00000475716 PIM2Q9P1W9 311 aa14.02□□□□□ -0.17
SNX5-208ENST00000475716 KDM2BQ8NHM5 1336 aa14.01□□□□□ -0.17
SNX5-208ENST00000475716 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
SNX5-208ENST00000475716 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
SNX5-208ENST00000475716 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
SNX5-208ENST00000475716 RFC4P35249 363 aa14.01□□□□□ -0.17
SNX5-208ENST00000475716 DALRD3Q5D0E6 543 aaKnown RBP14.01□□□□□ -0.17
SNX5-208ENST00000475716 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
SNX5-208ENST00000475716 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
SNX5-208ENST00000475716 FLT4P35916 1363 aa14□□□□□ -0.17
SNX5-208ENST00000475716 PHKG2P15735 406 aa14□□□□□ -0.17
SNX5-208ENST00000475716 CHRNA5P30532 468 aa14□□□□□ -0.17
SNX5-208ENST00000475716 EYA1Q99502 592 aa14□□□□□ -0.17
SNX5-208ENST00000475716 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
SNX5-208ENST00000475716 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
SNX5-208ENST00000475716 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
SNX5-208ENST00000475716 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
SNX5-208ENST00000475716 SRP68Q9UHB9 627 aaKnown RBP13.99□□□□□ -0.17
SNX5-208ENST00000475716 FKBP8Q14318 412 aa13.98□□□□□ -0.17
SNX5-208ENST00000475716 KIF13BQ9NQT8 1826 aa13.98□□□□□ -0.17
SNX5-208ENST00000475716 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
SNX5-208ENST00000475716 DDR1Q08345 913 aa13.97□□□□□ -0.17
SNX5-208ENST00000475716 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
SNX5-208ENST00000475716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.178e-24■■□□□ 12.3
SNX5-208ENST00000475716 RASSF7Q02833 373 aa13.96□□□□□ -0.17
SNX5-208ENST00000475716 KDRP35968 1356 aa13.96□□□□□ -0.18
SNX5-208ENST00000475716 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
SNX5-208ENST00000475716 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
SNX5-208ENST00000475716 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
SNX5-208ENST00000475716 CNTNAP4Q9C0A0 1308 aa13.94□□□□□ -0.18
SNX5-208ENST00000475716 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
SNX5-208ENST00000475716 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
SNX5-208ENST00000475716 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
SNX5-208ENST00000475716 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
SNX5-208ENST00000475716 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
SNX5-208ENST00000475716 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
SNX5-208ENST00000475716 TM4SF1P30408 202 aa13.93□□□□□ -0.18
SNX5-208ENST00000475716 GLTPD2A6NH11 291 aa13.92□□□□□ -0.18
SNX5-208ENST00000475716 POTECB2RU33 542 aa13.92□□□□□ -0.18
SNX5-208ENST00000475716 POLRMTO00411 1230 aaKnown RBP13.91□□□□□ -0.18
SNX5-208ENST00000475716 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
SNX5-208ENST00000475716 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
SNX5-208ENST00000475716 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
SNX5-208ENST00000475716 BRCA1P38398 1863 aaKnown RBP13.91□□□□□ -0.18
SNX5-208ENST00000475716 CABP4P57796 275 aa13.9□□□□□ -0.18
SNX5-208ENST00000475716 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
SNX5-208ENST00000475716 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
SNX5-208ENST00000475716 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
SNX5-208ENST00000475716 LMNB1P20700 586 aa13.89□□□□□ -0.19
SNX5-208ENST00000475716 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
SNX5-208ENST00000475716 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
SNX5-208ENST00000475716 ARFGEF1Q9Y6D6 1849 aa13.88□□□□□ -0.19
SNX5-208ENST00000475716 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
SNX5-208ENST00000475716 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
SNX5-208ENST00000475716 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
SNX5-208ENST00000475716 SBF1O95248 1867 aa13.87□□□□□ -0.19
SNX5-208ENST00000475716 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
SNX5-208ENST00000475716 FOXN1O15353 648 aa13.86□□□□□ -0.19
SNX5-208ENST00000475716 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
SNX5-208ENST00000475716 MTHFSP49914 203 aa13.86□□□□□ -0.19
SNX5-208ENST00000475716 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
SNX5-208ENST00000475716 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
SNX5-208ENST00000475716 NFKBIEO00221 500 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 ZPR1O75312 459 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 NFIXQ14938 502 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
SNX5-208ENST00000475716 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
SNX5-208ENST00000475716 TTLL6Q8N841 843 aa13.85□□□□□ -0.19
SNX5-208ENST00000475716 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
SNX5-208ENST00000475716 SLC34A2O95436 690 aa13.84□□□□□ -0.19
SNX5-208ENST00000475716 C2CD5Q86YS7 1000 aa13.84□□□□□ -0.19
SNX5-208ENST00000475716 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms