RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 KLRG1Q96E93 195 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.38□□□□□ -2.03
HDAC9-222ENST00000474742 CFHR5Q9BXR6 569 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 GIGYF1O75420 1035 aaPredicted RBP2.37□□□□□ -2.03
HDAC9-222ENST00000474742 MYCP01106 439 aaPredicted RBP2.37□□□□□ -2.03
HDAC9-222ENST00000474742 COL8A1P27658 744 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 GATA4P43694 442 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 SKIV2LQ15477 1246 aaKnown RBP2.37□□□□□ -2.03
HDAC9-222ENST00000474742 SH3D19Q5HYK7 790 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 WDR44Q5JSH3 913 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 CD163Q86VB7 1156 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 CCDC125Q86Z20 511 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 SUV39H2Q9H5I1 410 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 ARHGEF10LQ9HCE6 1279 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 GGA1Q9UJY5 639 aa2.37□□□□□ -2.03
HDAC9-222ENST00000474742 A0A1B0GTH6 734 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 NEURL1BA8MQ27 555 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ESPNB1AK53 854 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 SPATA31C2B4DYI2 1134 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 APBA3O96018 575 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 FGFR3P22607 806 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 CLN3Q13286 438 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 PRRT3Q5FWE3 981 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 SLCO4C1Q6ZQN7 724 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ZNF592Q92610 1267 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ABHD17AQ96GS6 310 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 DDRGK1Q96HY6 314 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 BTBD6Q96KE9 485 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ZSCAN10Q96SZ4 725 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-222ENST00000474742 OCSTAMPQ9BR26 566 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 GRIP2Q9C0E4 1043 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 RUBCNLQ9H714 662 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 RAB6BQ9NRW1 208 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ATXN7L1Q9ULK2 861 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-222ENST00000474742 ZNF330Q9Y3S2 320 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-222ENST00000474742 PCDHB11Q9Y5F2 797 aa2.36□□□□□ -2.03
HDAC9-222ENST00000474742 SPDYE3A6NKU9 549 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 ZBBXA8MT70 800 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 USP17L8P0C7I0 530 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 EPXP11678 715 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 CHRNA4P43681 627 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 FIGNL1Q6PIW4 674 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 C1orf229Q6ZS94 237 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-222ENST00000474742 RNF135Q8IUD6 432 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 EPS8L1Q8TE68 723 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 CNKSR1Q969H4 720 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 HMX1Q9NP08 348 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-222ENST00000474742 ZFP64Q9NPA5 681 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 PRR12Q9ULL5 1215 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 GJA3Q9Y6H8 435 aa2.35□□□□□ -2.03
HDAC9-222ENST00000474742 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 BTBD11A6QL63 1104 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 GPR37L1O60883 481 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 GNRH1P01148 92 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 SPATA31C1P0DKV0 1188 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 MSX1P28360 303 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 RFC5P40937 340 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 MCCD1P59942 119 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-222ENST00000474742 ERVK-9P63128 1117 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 CTBSQ01459 385 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 CENPCQ03188 943 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 LBRQ14739 615 aaKnown RBP2.34□□□□□ -2.03
HDAC9-222ENST00000474742 ESCO1Q5FWF5 840 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 ARSJQ5FYB0 599 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-222ENST00000474742 LINC00114Q6XXX2 140 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 TBC1D9Q6ZT07 1266 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 AIDAQ96BJ3 306 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 ESYT1Q9BSJ8 1104 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 PLVAPQ9BX97 442 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 GOPCQ9HD26 462 aa2.34□□□□□ -2.03
HDAC9-222ENST00000474742 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.33□□□□□ -2.04
HDAC9-222ENST00000474742 BNIP3LO60238 219 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 ARAFP10398 606 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 ALAS2P22557 587 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 ADH6P28332 368 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 PLA2G4AP47712 749 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 SCTRP47872 440 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 CHSY3Q70JA7 882 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 KRTAP1-3Q8IUG1 177 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 GJD4Q96KN9 370 aaPredicted RBP2.33□□□□□ -2.04
HDAC9-222ENST00000474742 TRIM34Q9BYJ4 488 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 PCDHGC4Q9Y5F7 938 aa2.33□□□□□ -2.04
HDAC9-222ENST00000474742 DCDC2BA2VCK2 349 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 C2CD2LO14523 706 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 KHNYNO15037 678 aaKnown RBP2.32□□□□□ -2.04
HDAC9-222ENST00000474742 ATXN7O15265 892 aaPredicted RBP2.32□□□□□ -2.04
HDAC9-222ENST00000474742 FBXO45P0C2W1 286 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 TATP17735 454 aaPredicted RBP2.32□□□□□ -2.04
HDAC9-222ENST00000474742 CD33P20138 364 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 DGKGP49619 791 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 TRIM28Q13263 835 aaKnown RBP2.32□□□□□ -2.04
HDAC9-222ENST00000474742 TLR1Q15399 786 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 C4orf17Q53FE4 359 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 ARTNQ5T4W7 220 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 RHBDD1Q8TEB9 315 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 NACC1Q96RE7 527 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 ZCCHC2Q9C0B9 1178 aaKnown RBP2.32□□□□□ -2.04
HDAC9-222ENST00000474742 OSBPL3Q9H4L5 887 aa2.32□□□□□ -2.04
HDAC9-222ENST00000474742 NEUROD4Q9HD90 331 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms