RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FEZ2Q9UHY8 353 aaPredicted RBP8□□□□□ -1.13
BRCA1-210ENST00000471181 ATF3P18847 181 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 WDR66Q8TBY9 1149 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 DYNC1I1O14576 645 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 PAFAH1B1P43034 410 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 CPLX3Q8WVH0 158 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 MCM2P49736 904 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 MNAT1P51948 309 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 DDX46Q7L014 1031 aaKnown RBP7.99□□□□□ -1.13
BRCA1-210ENST00000471181 CEP112Q8N8E3 955 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 PPP1R9BQ96SB3 815 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 STRN4Q9NRL3 753 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 KIF3CO14782 793 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 WDHD1O75717 1129 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-210ENST00000471181 SATB1Q01826 763 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 CEP131Q9UPN4 1083 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 MRVI1Q9Y6F6 885 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 HNRNPMP52272 730 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-210ENST00000471181 WDR33Q9C0J8 1336 aaKnown RBP7.99□□□□□ -1.13
BRCA1-210ENST00000471181 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 IQCGQ9H095 443 aaKnown RBP7.99□□□□□ -1.13
BRCA1-210ENST00000471181 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 ODF2LQ9ULJ1 636 aa7.99□□□□□ -1.13
BRCA1-210ENST00000471181 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 PRC1O43663 620 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 USO1O60763 962 aaKnown RBP7.98□□□□□ -1.13
BRCA1-210ENST00000471181 PTPN14Q15678 1187 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 ZSCAN25Q6NSZ9 544 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 BICDL1Q6ZP65 573 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 BBXQ8WY36 941 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-210ENST00000471181 MPHOSPH8Q99549 860 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 TMOD2Q9NZR1 351 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 DNMBPQ6XZF7 1577 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 NAA25Q14CX7 972 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 CCDC30Q5VVM6 783 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 MMRN2Q9H8L6 949 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 GRPEL1Q9HAV7 217 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 ACTN2P35609 894 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 EFCAB2Q5VUJ9 269 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 FAM114A1Q8IWE2 563 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 CEP120Q8N960 986 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 LRRC45Q96CN5 670 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 CALCOCO1Q9P1Z2 691 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 GTF2A1P52655 376 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-210ENST00000471181 WASF1Q92558 559 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 ALS2CR12Q96Q35 445 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 NESP48681 1621 aa7.98□□□□□ -1.13
BRCA1-210ENST00000471181 HSPA4P34932 840 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 CRACR2BQ8N4Y2 399 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 DNAAF4Q8WXU2 420 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 RUNDC1Q96C34 613 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 URB2Q14146 1524 aaKnown RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 NAA15Q9BXJ9 866 aaKnown RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 HYPKQ9NX55 129 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 FANCIQ9NVI1 1328 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 CEP135Q66GS9 1140 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 CEP83Q9Y592 693 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 PBRM1Q86U86 1689 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 CUL5Q93034 780 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 SMC6Q96SB8 1091 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 MKRN1Q9UHC7 482 aaKnown RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 NUTM2BA6NNL0 878 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 NUTM2EB1AL46 878 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 GNAI3P08754 354 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 ERCC3P19447 782 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 NUTM2AQ8IVF1 878 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 SYNCQ9H7C4 482 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 CWC25Q9NXE8 425 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-210ENST00000471181 SEPT10Q9P0V9 454 aa7.97□□□□□ -1.13
BRCA1-210ENST00000471181 TOP1P11387 765 aaKnown RBP7.96□□□□□ -1.13
BRCA1-210ENST00000471181 SFPQP23246 707 aaKnown RBP eCLIP7.96□□□□□ -1.13
BRCA1-210ENST00000471181 CCDC144CPQ8IYA2 1237 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 ST20-MTHFSA0A0A6YYL1 179 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 HSF2BPO75031 334 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 PRKCSHP14314 528 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-210ENST00000471181 MIPOL1Q8TD10 442 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 PFDN4Q9NQP4 134 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 LRP2BPQ9P2M1 347 aa7.96□□□□□ -1.13
BRCA1-210ENST00000471181 KIF4AO95239 1232 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 YEATS4O95619 227 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 TCERG1LQ5VWI1 586 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 JAKMIP1Q96N16 626 aaKnown RBP7.96□□□□□ -1.14
BRCA1-210ENST00000471181 POLR3DP05423 398 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-210ENST00000471181 RFC1P35251 1148 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-210ENST00000471181 ZBTB16Q05516 673 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 LRSAM1Q6UWE0 723 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC155Q8N6L0 562 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 KIF20AO95235 890 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 MYL6BP14649 208 aa7.96□□□□□ -1.14
BRCA1-210ENST00000471181 NSRP1Q9H0G5 558 aaKnown RBP7.96□□□□□ -1.14
BRCA1-210ENST00000471181 TRMT1Q9NXH9 659 aaKnown RBP7.96□□□□□ -1.14
BRCA1-210ENST00000471181 FGFR1OPO95684 399 aaKnown RBP7.95□□□□□ -1.14
BRCA1-210ENST00000471181 KIF5AQ12840 1032 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms