RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 MYSM1Q5VVJ2 828 aa8.99□□□□□ -0.97
CLIP4-209ENST00000471165 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
CLIP4-209ENST00000471165 ATXN7L1Q9ULK2 861 aaPredicted RBP8.99□□□□□ -0.97
CLIP4-209ENST00000471165 CTBSQ01459 385 aa8.98□□□□□ -0.97
CLIP4-209ENST00000471165 CHSY3Q70JA7 882 aa8.98□□□□□ -0.97
CLIP4-209ENST00000471165 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
CLIP4-209ENST00000471165 PPP2R2DQ66LE6 453 aa8.97□□□□□ -0.97
CLIP4-209ENST00000471165 TRIM52Q96A61 297 aa8.97□□□□□ -0.97
CLIP4-209ENST00000471165 ABHD17AQ96GS6 310 aa8.97□□□□□ -0.97
CLIP4-209ENST00000471165 PLVAPQ9BX97 442 aa8.97□□□□□ -0.97
CLIP4-209ENST00000471165 NEURL1BA8MQ27 555 aa8.96□□□□□ -0.98
CLIP4-209ENST00000471165 ARAFP10398 606 aa8.96□□□□□ -0.98
CLIP4-209ENST00000471165 FGFR3P22607 806 aa8.96□□□□□ -0.98
CLIP4-209ENST00000471165 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.98
CLIP4-209ENST00000471165 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
CLIP4-209ENST00000471165 LRRN4Q8WUT4 740 aa8.96□□□□□ -0.98
CLIP4-209ENST00000471165 CLN3Q13286 438 aa8.95□□□□□ -0.98
CLIP4-209ENST00000471165 NR6A1Q15406 480 aa8.95□□□□□ -0.98
CLIP4-209ENST00000471165 MCTP1Q6DN14 999 aa8.95□□□□□ -0.98
CLIP4-209ENST00000471165 SEPT12Q8IYM1 358 aa8.95□□□□□ -0.98
CLIP4-209ENST00000471165 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
CLIP4-209ENST00000471165 ARID1BQ8NFD5 2236 aaPredicted RBP8.94□□□□□ -0.98
CLIP4-209ENST00000471165 NDFIP2Q9NV92 336 aa8.93□□□□□ -0.98
CLIP4-209ENST00000471165 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLIP4-209ENST00000471165 KRTAP4-9Q9BYQ8 210 aa8.92□□□□□ -0.98
CLIP4-209ENST00000471165 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
CLIP4-209ENST00000471165 BNIP3LO60238 219 aa8.91□□□□□ -0.98
CLIP4-209ENST00000471165 RUBCNLQ9H714 662 aa8.91□□□□□ -0.98
CLIP4-209ENST00000471165 PHKA2P46019 1235 aa8.9□□□□□ -0.98
CLIP4-209ENST00000471165 APBA3O96018 575 aa8.89□□□□□ -0.99
CLIP4-209ENST00000471165 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
CLIP4-209ENST00000471165 TXKP42681 527 aa8.89□□□□□ -0.99
CLIP4-209ENST00000471165 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
CLIP4-209ENST00000471165 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
CLIP4-209ENST00000471165 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
CLIP4-209ENST00000471165 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
CLIP4-209ENST00000471165 PAX4O43316 350 aa8.87□□□□□ -0.99
CLIP4-209ENST00000471165 EFHC2Q5JST6 749 aa8.87□□□□□ -0.99
CLIP4-209ENST00000471165 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
CLIP4-209ENST00000471165 ARHGEF10LQ9HCE6 1279 aa8.87□□□□□ -0.99
CLIP4-209ENST00000471165 KLF15Q9UIH9 416 aa8.87□□□□□ -0.99
CLIP4-209ENST00000471165 PRRT3Q5FWE3 981 aa8.86□□□□□ -0.99
CLIP4-209ENST00000471165 CYP2U1Q7Z449 544 aa8.86□□□□□ -0.99
CLIP4-209ENST00000471165 FCHSD1Q86WN1 690 aa8.86□□□□□ -0.99
CLIP4-209ENST00000471165 ADH6P28332 368 aa8.85□□□□□ -0.99
CLIP4-209ENST00000471165 MSX1P28360 303 aa8.85□□□□□ -0.99
CLIP4-209ENST00000471165 CLK2P49760 499 aaKnown RBP8.85□□□□□ -0.99
CLIP4-209ENST00000471165 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
CLIP4-209ENST00000471165 H2AFB1P0C5Y9 115 aa8.84□□□□□ -0.99
CLIP4-209ENST00000471165 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
CLIP4-209ENST00000471165 KRTAP4-2Q9BYR5 136 aa8.84□□□□□ -0.99
CLIP4-209ENST00000471165 COL17A1Q9UMD9 1497 aaPredicted RBP8.83□□□□□ -1
CLIP4-209ENST00000471165 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
CLIP4-209ENST00000471165 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
CLIP4-209ENST00000471165 SCTRP47872 440 aa8.81□□□□□ -1
CLIP4-209ENST00000471165 CENPCQ03188 943 aa8.81□□□□□ -1
CLIP4-209ENST00000471165 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
CLIP4-209ENST00000471165 ZMYND10O75800 440 aa8.8□□□□□ -1
CLIP4-209ENST00000471165 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
CLIP4-209ENST00000471165 FAM229AH3BQW9 127 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 FZD5Q13467 585 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 CNKSR1Q969H4 720 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 NACC1Q96RE7 527 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
CLIP4-209ENST00000471165 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
CLIP4-209ENST00000471165 TRAK2O60296 914 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 C4orf17Q53FE4 359 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
CLIP4-209ENST00000471165 CCDC125Q86Z20 511 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 PNMA1Q8ND90 353 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
CLIP4-209ENST00000471165 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 PCDHGC4Q9Y5F7 938 aa8.78□□□□□ -1
CLIP4-209ENST00000471165 IL2RAP01589 272 aa8.77□□□□□ -1.01
CLIP4-209ENST00000471165 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
CLIP4-209ENST00000471165 FIGNL1Q6PIW4 674 aa8.77□□□□□ -1.01
CLIP4-209ENST00000471165 ZCCHC2Q9C0B9 1178 aaKnown RBP8.77□□□□□ -1.01
CLIP4-209ENST00000471165 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
CLIP4-209ENST00000471165 HCN2Q9UL51 889 aa8.77□□□□□ -1.01
CLIP4-209ENST00000471165 TRIM66O15016 1216 aa8.76□□□□□ -1.01
CLIP4-209ENST00000471165 ELNP15502 786 aa8.76□□□□□ -1.01
CLIP4-209ENST00000471165 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
CLIP4-209ENST00000471165 PCBP4P57723 403 aaKnown RBP8.75□□□□□ -1.01
CLIP4-209ENST00000471165 FAM182BQ5T319 152 aa8.75□□□□□ -1.01
CLIP4-209ENST00000471165 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
CLIP4-209ENST00000471165 HRH3Q9Y5N1 445 aa8.75□□□□□ -1.01
CLIP4-209ENST00000471165 CD33P20138 364 aa8.74□□□□□ -1.01
CLIP4-209ENST00000471165 GRIK4Q16099 956 aa8.74□□□□□ -1.01
CLIP4-209ENST00000471165 GNRH1P01148 92 aa8.73□□□□□ -1.01
CLIP4-209ENST00000471165 GTF2E1P29083 439 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-209ENST00000471165 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
CLIP4-209ENST00000471165 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-209ENST00000471165 PCDHB9Q9Y5E1 797 aa8.73□□□□□ -1.01
CLIP4-209ENST00000471165 ZNF468Q5VIY5 522 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-209ENST00000471165 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-209ENST00000471165 ATXN7O15265 892 aaPredicted RBP8.71□□□□□ -1.02
CLIP4-209ENST00000471165 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
CLIP4-209ENST00000471165 COL9A3Q14050 684 aaPredicted RBP8.71□□□□□ -1.02
CLIP4-209ENST00000471165 RNF20Q5VTR2 975 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms