RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FBXO31Q5XUX0 539 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-211ENST00000466054 GNB5O14775 395 aa9.71□□□□□ -0.86
LRCH3-211ENST00000466054 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
LRCH3-211ENST00000466054 A0A1B0GTH6 734 aa9.7□□□□□ -0.86
LRCH3-211ENST00000466054 PHKA2P46019 1235 aa9.7□□□□□ -0.86
LRCH3-211ENST00000466054 NOP53Q9NZM5 478 aaKnown RBP9.7□□□□□ -0.86
LRCH3-211ENST00000466054 PCDHB11Q9Y5F2 797 aa9.7□□□□□ -0.86
LRCH3-211ENST00000466054 C1QTNF9BB2RNN3 333 aa9.69□□□□□ -0.86
LRCH3-211ENST00000466054 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
LRCH3-211ENST00000466054 GNASQ5JWF2 1037 aa9.69□□□□□ -0.86
LRCH3-211ENST00000466054 ZNF592Q92610 1267 aa9.69□□□□□ -0.86
LRCH3-211ENST00000466054 RAB6BQ9NRW1 208 aa9.69□□□□□ -0.86
LRCH3-211ENST00000466054 C1orf229Q6ZS94 237 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-211ENST00000466054 SUV39H2Q9H5I1 410 aa9.68□□□□□ -0.86
LRCH3-211ENST00000466054 SEMA6BQ9H3T3 888 aa9.67□□□□□ -0.86
LRCH3-211ENST00000466054 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-211ENST00000466054 FBXO45P0C2W1 286 aa9.66□□□□□ -0.86
LRCH3-211ENST00000466054 SCTRP47872 440 aa9.66□□□□□ -0.86
LRCH3-211ENST00000466054 LBRQ14739 615 aaKnown RBP9.66□□□□□ -0.86
LRCH3-211ENST00000466054 TMEM214Q6NUQ4 689 aaKnown RBP9.66□□□□□ -0.86
LRCH3-211ENST00000466054 SLCO4C1Q6ZQN7 724 aa9.66□□□□□ -0.86
LRCH3-211ENST00000466054 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
LRCH3-211ENST00000466054 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-211ENST00000466054 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
LRCH3-211ENST00000466054 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-211ENST00000466054 MCCD1P59942 119 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-211ENST00000466054 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
LRCH3-211ENST00000466054 CD163Q86VB7 1156 aa9.65□□□□□ -0.86
LRCH3-211ENST00000466054 RUBCNLQ9H714 662 aa9.65□□□□□ -0.86
LRCH3-211ENST00000466054 GNRH1P01148 92 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 FGFR3P22607 806 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 RFC5P40937 340 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 CENPCQ03188 943 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 OSBPL3Q9H4L5 887 aa9.64□□□□□ -0.87
LRCH3-211ENST00000466054 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
LRCH3-211ENST00000466054 ZMYM1Q5SVZ6 1142 aa9.63□□□□□ -0.87
LRCH3-211ENST00000466054 TRIM34Q9BYJ4 488 aa9.63□□□□□ -0.87
LRCH3-211ENST00000466054 SCO2A0A1W2PP80 73 aa9.62□□□□□ -0.87
LRCH3-211ENST00000466054 THBS1P07996 1170 aa9.62□□□□□ -0.87
LRCH3-211ENST00000466054 BTBD6Q96KE9 485 aa9.62□□□□□ -0.87
LRCH3-211ENST00000466054 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
LRCH3-211ENST00000466054 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
LRCH3-211ENST00000466054 TRAK2O60296 914 aa9.61□□□□□ -0.87
LRCH3-211ENST00000466054 MSX1P28360 303 aa9.61□□□□□ -0.87
LRCH3-211ENST00000466054 DOC2BQ14184 412 aa9.61□□□□□ -0.87
LRCH3-211ENST00000466054 EPXP11678 715 aa9.6□□□□□ -0.87
LRCH3-211ENST00000466054 CHRNA4P43681 627 aa9.6□□□□□ -0.87
LRCH3-211ENST00000466054 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
LRCH3-211ENST00000466054 IL2RAP01589 272 aa9.59□□□□□ -0.87
LRCH3-211ENST00000466054 CTBSQ01459 385 aa9.59□□□□□ -0.87
LRCH3-211ENST00000466054 TMEM259Q4ZIN3 620 aa9.59□□□□□ -0.87
LRCH3-211ENST00000466054 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-211ENST00000466054 NEURL1BA8MQ27 555 aa9.58□□□□□ -0.88
LRCH3-211ENST00000466054 C2CD2LO14523 706 aa9.58□□□□□ -0.88
LRCH3-211ENST00000466054 ARAFP10398 606 aa9.58□□□□□ -0.88
LRCH3-211ENST00000466054 ESCO1Q5FWF5 840 aa9.58□□□□□ -0.88
LRCH3-211ENST00000466054 FIGNL1Q6PIW4 674 aa9.58□□□□□ -0.88
LRCH3-211ENST00000466054 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-211ENST00000466054 DGKGP49619 791 aa9.57□□□□□ -0.88
LRCH3-211ENST00000466054 NR1H3Q13133 447 aa9.57□□□□□ -0.88
LRCH3-211ENST00000466054 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
LRCH3-211ENST00000466054 BNIP3LO60238 219 aa9.56□□□□□ -0.88
LRCH3-211ENST00000466054 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-211ENST00000466054 GATA4P43694 442 aa9.56□□□□□ -0.88
LRCH3-211ENST00000466054 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
LRCH3-211ENST00000466054 CHSY3Q70JA7 882 aa9.56□□□□□ -0.88
LRCH3-211ENST00000466054 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
LRCH3-211ENST00000466054 TBC1D9Q6ZT07 1266 aa9.55□□□□□ -0.88
LRCH3-211ENST00000466054 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
LRCH3-211ENST00000466054 ADH6P28332 368 aa9.53□□□□□ -0.88
LRCH3-211ENST00000466054 RHBDD1Q8TEB9 315 aa9.53□□□□□ -0.88
LRCH3-211ENST00000466054 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
LRCH3-211ENST00000466054 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
LRCH3-211ENST00000466054 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
LRCH3-211ENST00000466054 KRTAP9-6A0A140TA67 174 aa9.51□□□□□ -0.89
LRCH3-211ENST00000466054 SPATA31C1P0DKV0 1188 aa9.51□□□□□ -0.89
LRCH3-211ENST00000466054 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
LRCH3-211ENST00000466054 TLR1Q15399 786 aa9.51□□□□□ -0.89
LRCH3-211ENST00000466054 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-211ENST00000466054 CRISPLD1Q9H336 500 aa9.51□□□□□ -0.89
LRCH3-211ENST00000466054 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
LRCH3-211ENST00000466054 ITGB7P26010 798 aa9.5□□□□□ -0.89
LRCH3-211ENST00000466054 ZCCHC2Q9C0B9 1178 aaKnown RBP9.5□□□□□ -0.89
LRCH3-211ENST00000466054 ATXN7O15265 892 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-211ENST00000466054 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
LRCH3-211ENST00000466054 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-211ENST00000466054 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
LRCH3-211ENST00000466054 PRR12Q9ULL5 1215 aa9.49□□□□□ -0.89
LRCH3-211ENST00000466054 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
LRCH3-211ENST00000466054 APBA3O96018 575 aa9.48□□□□□ -0.89
LRCH3-211ENST00000466054 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
LRCH3-211ENST00000466054 NBPF11Q86T75 865 aa9.48□□□□□ -0.89
LRCH3-211ENST00000466054 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
LRCH3-211ENST00000466054 DCDC2BA2VCK2 349 aa9.47□□□□□ -0.89
LRCH3-211ENST00000466054 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-211ENST00000466054 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
LRCH3-211ENST00000466054 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
LRCH3-211ENST00000466054 C1orf216Q8TAB5 229 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms