RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 FCHSD2O94868 740 aa19.63■□□□□ 0.73
LINC00642-202ENST00000442515 DPEP1P16444 411 aa19.63■□□□□ 0.73
LINC00642-202ENST00000442515 ATP6V1AP38606 617 aa19.63■□□□□ 0.73
LINC00642-202ENST00000442515 FSTL1Q12841 308 aa19.63■□□□□ 0.73
LINC00642-202ENST00000442515 C9orf131Q5VYM1 1079 aa19.63■□□□□ 0.73
LINC00642-202ENST00000442515 PRELPP51888 382 aa19.62■□□□□ 0.73
LINC00642-202ENST00000442515 TMOD3Q9NYL9 352 aa19.62■□□□□ 0.73
LINC00642-202ENST00000442515 ASAP1Q9ULH1 1129 aa19.62■□□□□ 0.73
LINC00642-202ENST00000442515 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
LINC00642-202ENST00000442515 ITGB4P16144 1822 aa19.6■□□□□ 0.73
LINC00642-202ENST00000442515 KIF24Q5T7B8 1368 aa19.6■□□□□ 0.73
LINC00642-202ENST00000442515 PKD1L3Q7Z443 1732 aa19.6■□□□□ 0.73
LINC00642-202ENST00000442515 CCDC87Q9NVE4 849 aa19.6■□□□□ 0.73
LINC00642-202ENST00000442515 KCPQ6ZWJ8 1503 aa19.6■□□□□ 0.73
LINC00642-202ENST00000442515 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
LINC00642-202ENST00000442515 TMF1P82094 1093 aa19.59■□□□□ 0.73
LINC00642-202ENST00000442515 NLGN1Q8N2Q7 840 aa19.59■□□□□ 0.73
LINC00642-202ENST00000442515 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
LINC00642-202ENST00000442515 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
LINC00642-202ENST00000442515 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
LINC00642-202ENST00000442515 RTCBQ9Y3I0 505 aaKnown RBP19.58■□□□□ 0.72
LINC00642-202ENST00000442515 KDRP35968 1356 aa19.57■□□□□ 0.72
LINC00642-202ENST00000442515 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
LINC00642-202ENST00000442515 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
LINC00642-202ENST00000442515 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
LINC00642-202ENST00000442515 KCNA3P22001 575 aa19.56■□□□□ 0.72
LINC00642-202ENST00000442515 EMILIN1Q9Y6C2 1016 aa19.56■□□□□ 0.72
LINC00642-202ENST00000442515 GYS1P13807 737 aa19.55■□□□□ 0.72
LINC00642-202ENST00000442515 ARHGEF1Q92888 912 aaKnown RBP19.55■□□□□ 0.72
LINC00642-202ENST00000442515 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
LINC00642-202ENST00000442515 RNF181Q9P0P0 153 aa19.55■□□□□ 0.72
LINC00642-202ENST00000442515 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
LINC00642-202ENST00000442515 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
LINC00642-202ENST00000442515 ADRA2BP18089 450 aa19.54■□□□□ 0.72
LINC00642-202ENST00000442515 RRAGCQ9HB90 399 aa19.54■□□□□ 0.72
LINC00642-202ENST00000442515 PHKG2P15735 406 aa19.53■□□□□ 0.72
LINC00642-202ENST00000442515 SMC1BQ8NDV3 1235 aa19.53■□□□□ 0.72
LINC00642-202ENST00000442515 SLC4A9Q96Q91 983 aa19.53■□□□□ 0.72
LINC00642-202ENST00000442515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
LINC00642-202ENST00000442515 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
LINC00642-202ENST00000442515 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.72
LINC00642-202ENST00000442515 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
LINC00642-202ENST00000442515 TONSLQ96HA7 1378 aa19.52■□□□□ 0.72
LINC00642-202ENST00000442515 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
LINC00642-202ENST00000442515 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
LINC00642-202ENST00000442515 HSPA1AP0DMV8 641 aaKnown RBP19.51■□□□□ 0.71
LINC00642-202ENST00000442515 HSPA1BP0DMV9 641 aaKnown RBP19.51■□□□□ 0.71
LINC00642-202ENST00000442515 RFC4P35249 363 aa19.51■□□□□ 0.71
LINC00642-202ENST00000442515 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
LINC00642-202ENST00000442515 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
LINC00642-202ENST00000442515 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
LINC00642-202ENST00000442515 EYA1Q99502 592 aa19.49■□□□□ 0.71
LINC00642-202ENST00000442515 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
LINC00642-202ENST00000442515 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
LINC00642-202ENST00000442515 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
LINC00642-202ENST00000442515 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
LINC00642-202ENST00000442515 CHRNA5P30532 468 aa19.46■□□□□ 0.71
LINC00642-202ENST00000442515 DDR1Q08345 913 aa19.46■□□□□ 0.71
LINC00642-202ENST00000442515 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
LINC00642-202ENST00000442515 KIF20BQ96Q89 1820 aa19.45■□□□□ 0.7
LINC00642-202ENST00000442515 ZC3H4Q9UPT8 1303 aaKnown RBP19.45■□□□□ 0.7
LINC00642-202ENST00000442515 RASSF7Q02833 373 aa19.44■□□□□ 0.7
LINC00642-202ENST00000442515 FKBP8Q14318 412 aa19.44■□□□□ 0.7
LINC00642-202ENST00000442515 SRP68Q9UHB9 627 aaKnown RBP19.44■□□□□ 0.7
LINC00642-202ENST00000442515 ERVV-2B6SEH9 535 aa19.43■□□□□ 0.7
LINC00642-202ENST00000442515 ZNF831Q5JPB2 1677 aa19.43■□□□□ 0.7
LINC00642-202ENST00000442515 COL5A3P25940 1745 aaPredicted RBP19.42■□□□□ 0.7
LINC00642-202ENST00000442515 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
LINC00642-202ENST00000442515 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
LINC00642-202ENST00000442515 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
LINC00642-202ENST00000442515 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
LINC00642-202ENST00000442515 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
LINC00642-202ENST00000442515 CRKLP46109 303 aaKnown RBP19.4■□□□□ 0.7
LINC00642-202ENST00000442515 GLTPD2A6NH11 291 aa19.39■□□□□ 0.69
LINC00642-202ENST00000442515 POLRMTO00411 1230 aaKnown RBP19.39■□□□□ 0.69
LINC00642-202ENST00000442515 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
LINC00642-202ENST00000442515 LMNB1P20700 586 aa19.38■□□□□ 0.69
LINC00642-202ENST00000442515 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
LINC00642-202ENST00000442515 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
LINC00642-202ENST00000442515 CABP4P57796 275 aa19.37■□□□□ 0.69
LINC00642-202ENST00000442515 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
LINC00642-202ENST00000442515 MYH14Q7Z406 1995 aaKnown RBP19.35■□□□□ 0.69
LINC00642-202ENST00000442515 TM4SF1P30408 202 aa19.35■□□□□ 0.69
LINC00642-202ENST00000442515 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
LINC00642-202ENST00000442515 SBF1O95248 1867 aa19.33■□□□□ 0.69
LINC00642-202ENST00000442515 ZNF530Q6P9A1 599 aaPredicted RBP19.33■□□□□ 0.68
LINC00642-202ENST00000442515 INTS5Q6P9B9 1019 aaKnown RBP19.32■□□□□ 0.68
LINC00642-202ENST00000442515 POTECB2RU33 542 aa19.31■□□□□ 0.68
LINC00642-202ENST00000442515 NFKBIEO00221 500 aa19.31■□□□□ 0.68
LINC00642-202ENST00000442515 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
LINC00642-202ENST00000442515 USPL1Q5W0Q7 1092 aa19.31■□□□□ 0.68
LINC00642-202ENST00000442515 ZPR1O75312 459 aa19.3■□□□□ 0.68
LINC00642-202ENST00000442515 SLC34A2O95436 690 aa19.3■□□□□ 0.68
LINC00642-202ENST00000442515 MTHFSP49914 203 aa19.3■□□□□ 0.68
LINC00642-202ENST00000442515 CREBZFQ9NS37 354 aa19.3■□□□□ 0.68
LINC00642-202ENST00000442515 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
LINC00642-202ENST00000442515 NFIXQ14938 502 aa19.29■□□□□ 0.68
LINC00642-202ENST00000442515 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
LINC00642-202ENST00000442515 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
LINC00642-202ENST00000442515 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms