RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 E2F4Q16254 413 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 ERCC6LQ2NKX8 1250 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 CACTINQ8WUQ7 758 aaKnown RBP11.7□□□□□ -0.54
ATL1-202ENST00000441560 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
ATL1-202ENST00000441560 APBB1O00213 710 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 SLU7O95391 586 aaKnown RBP11.69□□□□□ -0.54
ATL1-202ENST00000441560 PLA2G4AP47712 749 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 CUL4AQ13619 759 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 SMARCE1Q969G3 411 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 TCHHQ07283 1943 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 PTPRCP08575 1304 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 GOLIM4O00461 696 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 CLCN6P51797 869 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 DONSONQ9NYP3 566 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 MCM2P49736 904 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 GOLGA6L1Q8N7Z2 621 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
ATL1-202ENST00000441560 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 CXorf56Q9H5V9 222 aa11.69□□□□□ -0.54
ATL1-202ENST00000441560 MYOM1P52179 1685 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 TOPBP1Q92547 1522 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 ERC2O15083 957 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 TPM4P67936 248 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 TSGA10IPQ3SY00 556 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 TMEM87AQ8NBN3 555 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
ATL1-202ENST00000441560 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
ATL1-202ENST00000441560 ERBB3P21860 1342 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 ABCC11Q96J66 1382 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 DNMBPQ6XZF7 1577 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 GPS2Q13227 327 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 ZCCHC17Q9NP64 241 aaKnown RBP11.68□□□□□ -0.54
ATL1-202ENST00000441560 SUFUQ9UMX1 484 aa11.68□□□□□ -0.54
ATL1-202ENST00000441560 SHPRHQ149N8 1683 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 NUP153P49790 1475 aaKnown RBP11.67□□□□□ -0.54
ATL1-202ENST00000441560 H2AFXP16104 143 aaPredicted RBP11.67□□□□□ -0.54
ATL1-202ENST00000441560 TDO2P48775 406 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 ATG3Q9NT62 314 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
ATL1-202ENST00000441560 SRLQ86TD4 932 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 UPF3BQ9BZI7 483 aaKnown RBP11.67□□□□□ -0.54
ATL1-202ENST00000441560 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
ATL1-202ENST00000441560 RRP15Q9Y3B9 282 aaKnown RBP11.67□□□□□ -0.54
ATL1-202ENST00000441560 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATL1-202ENST00000441560 CAMK4Q16566 473 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 CEP120Q8N960 986 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 DEF6Q9H4E7 631 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 TROQ12816 1431 aaPredicted RBP11.66□□□□□ -0.54
ATL1-202ENST00000441560 A0A1B0GUL7 405 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 CCDC144BQ3MJ40 725 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 CCDC144CPQ8IYA2 1237 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATL1-202ENST00000441560 CCDC171Q6TFL3 1326 aa11.66□□□□□ -0.54
ATL1-202ENST00000441560 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 ZNF75DP51815 510 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 TTC31Q49AM3 519 aaPredicted RBP11.65□□□□□ -0.54
ATL1-202ENST00000441560 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 PALD1Q9ULE6 856 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.54
ATL1-202ENST00000441560 PBRM1Q86U86 1689 aa11.65□□□□□ -0.54
ATL1-202ENST00000441560 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.55
ATL1-202ENST00000441560 NYAP1Q6ZVC0 841 aa11.65□□□□□ -0.55
ATL1-202ENST00000441560 LRRN4CLQ8ND94 238 aa11.65□□□□□ -0.55
ATL1-202ENST00000441560 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
ATL1-202ENST00000441560 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 ATP10AO60312 1499 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 TMPOP42166 694 aaKnown RBP11.64□□□□□ -0.55
ATL1-202ENST00000441560 TYRO3Q06418 890 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
ATL1-202ENST00000441560 SKILP12757 684 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 MRVI1Q9Y6F6 885 aa11.64□□□□□ -0.55
ATL1-202ENST00000441560 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
ATL1-202ENST00000441560 CCDC91Q7Z6B0 441 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 MED14O60244 1454 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 CLTCL1P53675 1640 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 MCCP23508 829 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 OAS2P29728 719 aaKnown RBP11.63□□□□□ -0.55
ATL1-202ENST00000441560 LMAN1P49257 510 aa11.63□□□□□ -0.55
ATL1-202ENST00000441560 PLA2G4DQ86XP0 818 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms