RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 NR6A1Q15406 480 aa7.01□□□□□ -1.29
R3HDM1-205ENST00000425804 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
R3HDM1-205ENST00000425804 RNF135Q8IUD6 432 aa7.01□□□□□ -1.29
R3HDM1-205ENST00000425804 SPATA31C1P0DKV0 1188 aa7□□□□□ -1.29
R3HDM1-205ENST00000425804 LRP8Q14114 963 aa7□□□□□ -1.29
R3HDM1-205ENST00000425804 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
R3HDM1-205ENST00000425804 CHSY3Q70JA7 882 aa7□□□□□ -1.29
R3HDM1-205ENST00000425804 TRIM52Q96A61 297 aa7□□□□□ -1.29
R3HDM1-205ENST00000425804 ATXN7L1Q9ULK2 861 aaPredicted RBP7□□□□□ -1.29
R3HDM1-205ENST00000425804 CTBSQ01459 385 aa6.99□□□□□ -1.29
R3HDM1-205ENST00000425804 SEPT12Q8IYM1 358 aa6.99□□□□□ -1.29
R3HDM1-205ENST00000425804 TRIM11Q96F44 468 aa6.99□□□□□ -1.29
R3HDM1-205ENST00000425804 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
R3HDM1-205ENST00000425804 NEURL1BA8MQ27 555 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 COBLO75128 1261 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 FGFR3P22607 806 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 CLN3Q13286 438 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 BARGINQ6ZT62 677 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 PLVAPQ9BX97 442 aa6.98□□□□□ -1.29
R3HDM1-205ENST00000425804 ARAFP10398 606 aa6.97□□□□□ -1.29
R3HDM1-205ENST00000425804 LBRQ14739 615 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-205ENST00000425804 HYAL3O43820 417 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-205ENST00000425804 NDFIP2Q9NV92 336 aa6.96□□□□□ -1.3
R3HDM1-205ENST00000425804 A0A1B0GTH6 734 aa6.95□□□□□ -1.3
R3HDM1-205ENST00000425804 BNIP3LO60238 219 aa6.95□□□□□ -1.3
R3HDM1-205ENST00000425804 PHKA2P46019 1235 aa6.95□□□□□ -1.3
R3HDM1-205ENST00000425804 CLK2P49760 499 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-205ENST00000425804 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
R3HDM1-205ENST00000425804 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
R3HDM1-205ENST00000425804 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
R3HDM1-205ENST00000425804 CC2D2BQ6DHV5 1058 aa6.94□□□□□ -1.3
R3HDM1-205ENST00000425804 MCTP1Q6DN14 999 aa6.94□□□□□ -1.3
R3HDM1-205ENST00000425804 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
R3HDM1-205ENST00000425804 ARHGEF10LQ9HCE6 1279 aa6.93□□□□□ -1.3
R3HDM1-205ENST00000425804 ZMYND10O75800 440 aa6.92□□□□□ -1.3
R3HDM1-205ENST00000425804 EFHC2Q5JST6 749 aa6.92□□□□□ -1.3
R3HDM1-205ENST00000425804 CYP2U1Q7Z449 544 aa6.92□□□□□ -1.3
R3HDM1-205ENST00000425804 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-205ENST00000425804 APBA3O96018 575 aa6.91□□□□□ -1.3
R3HDM1-205ENST00000425804 ADH6P28332 368 aa6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 MSX1P28360 303 aa6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 FCHSD1Q86WN1 690 aa6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 EPS8L1Q8TE68 723 aa6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
R3HDM1-205ENST00000425804 TRIM66O15016 1216 aa6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 YBX3P16989 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 SCTRP47872 440 aa6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 PRRT3Q5FWE3 981 aa6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 RAB6BQ9NRW1 208 aa6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
R3HDM1-205ENST00000425804 CENPCQ03188 943 aa6.88□□□□□ -1.31
R3HDM1-205ENST00000425804 PNMA1Q8ND90 353 aa6.88□□□□□ -1.31
R3HDM1-205ENST00000425804 SPDYE3A6NKU9 549 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 PAX4O43316 350 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 TXKP42681 527 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 CNKSR1Q969H4 720 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 OSBPL3Q9H4L5 887 aa6.87□□□□□ -1.31
R3HDM1-205ENST00000425804 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 TRAK2O60296 914 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 IL2RAP01589 272 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 H2AFB2P0C5Z0 115 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 ZSCAN10Q96SZ4 725 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 ESYT1Q9BSJ8 1104 aa6.86□□□□□ -1.31
R3HDM1-205ENST00000425804 GNASQ5JWF2 1037 aa6.85□□□□□ -1.31
R3HDM1-205ENST00000425804 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
R3HDM1-205ENST00000425804 CRISPLD1Q9H336 500 aa6.85□□□□□ -1.31
R3HDM1-205ENST00000425804 AVENQ9NQS1 362 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-205ENST00000425804 FBXO31Q5XUX0 539 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 FIGNL1Q6PIW4 674 aa6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 NACC1Q96RE7 527 aa6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 HCN2Q9UL51 889 aa6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 PCDHGC4Q9Y5F7 938 aa6.84□□□□□ -1.31
R3HDM1-205ENST00000425804 TMEM214Q6NUQ4 689 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 FMNL2Q96PY5 1086 aa6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 ZCCHC2Q9C0B9 1178 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 HMX1Q9NP08 348 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 HRH3Q9Y5N1 445 aa6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 COL17A1Q9UMD9 1497 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-205ENST00000425804 GNRH1P01148 92 aa6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 CD33P20138 364 aa6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 RSPH6AQ9H0K4 717 aa6.82□□□□□ -1.32
R3HDM1-205ENST00000425804 ARID1BQ8NFD5 2236 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 GRIK4Q16099 956 aa6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 RNF20Q5VTR2 975 aa6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 ESF1Q9H501 851 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-205ENST00000425804 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 ATXN7O15265 892 aaPredicted RBP6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 AP1G2O75843 785 aa6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 ELNP15502 786 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms