RNA–Protein interactions for RNA: ENST00000421604.1

AP001116.1-201, humanhuman

TSL 3 BASIC

Gene AP001116.1, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001116.1-201ENST00000421604 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
AP001116.1-201ENST00000421604 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
AP001116.1-201ENST00000421604 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
AP001116.1-201ENST00000421604 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
AP001116.1-201ENST00000421604 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
AP001116.1-201ENST00000421604 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
AP001116.1-201ENST00000421604 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
AP001116.1-201ENST00000421604 DISP2A7MBM2 1401 aa11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 TCP11L2Q8N4U5 519 aa11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
AP001116.1-201ENST00000421604 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 A0A0G2JS52 829 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 PPP1R37O75864 691 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 MTHFSP49914 203 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 MYT1Q01538 1121 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 MEGF6O75095 1541 aa11.35□□□□□ -0.59
AP001116.1-201ENST00000421604 PPP2R1AP30153 589 aa11.34□□□□□ -0.59
AP001116.1-201ENST00000421604 EIF4A2Q14240 407 aaKnown RBP11.34□□□□□ -0.59
AP001116.1-201ENST00000421604 RALBP1Q15311 655 aa11.34□□□□□ -0.59
AP001116.1-201ENST00000421604 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
AP001116.1-201ENST00000421604 OVOS2A0A0G2JMS6 1433 aa11.33□□□□□ -0.6
AP001116.1-201ENST00000421604 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
AP001116.1-201ENST00000421604 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 USHBP1Q8N6Y0 703 aa11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
AP001116.1-201ENST00000421604 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
AP001116.1-201ENST00000421604 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
AP001116.1-201ENST00000421604 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
AP001116.1-201ENST00000421604 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
AP001116.1-201ENST00000421604 PLEKHG2Q9H7P9 1386 aa11.3□□□□□ -0.6
AP001116.1-201ENST00000421604 DIAPH1O60610 1272 aaKnown RBP11.3□□□□□ -0.6
AP001116.1-201ENST00000421604 IL2RBP14784 551 aa11.3□□□□□ -0.6
AP001116.1-201ENST00000421604 EYA1Q99502 592 aa11.3□□□□□ -0.6
AP001116.1-201ENST00000421604 KDRP35968 1356 aa11.29□□□□□ -0.6
AP001116.1-201ENST00000421604 IL13P35225 146 aa11.29□□□□□ -0.6
AP001116.1-201ENST00000421604 DDB1Q16531 1140 aa11.29□□□□□ -0.6
AP001116.1-201ENST00000421604 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
AP001116.1-201ENST00000421604 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
AP001116.1-201ENST00000421604 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
AP001116.1-201ENST00000421604 TNS1Q9HBL0 1735 aaKnown RBP11.27□□□□□ -0.61
AP001116.1-201ENST00000421604 ANP32CO43423 234 aa11.27□□□□□ -0.61
AP001116.1-201ENST00000421604 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
AP001116.1-201ENST00000421604 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
AP001116.1-201ENST00000421604 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
AP001116.1-201ENST00000421604 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
AP001116.1-201ENST00000421604 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
AP001116.1-201ENST00000421604 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
AP001116.1-201ENST00000421604 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
AP001116.1-201ENST00000421604 PDE4AP27815 886 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
AP001116.1-201ENST00000421604 EXOC5O00471 708 aa11.24□□□□□ -0.61
AP001116.1-201ENST00000421604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
AP001116.1-201ENST00000421604 BCL9O00512 1426 aa11.24□□□□□ -0.61
AP001116.1-201ENST00000421604 HMOX1P09601 288 aa11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 E2F4Q16254 413 aa11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
AP001116.1-201ENST00000421604 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 FAM182BQ5T319 152 aa11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
AP001116.1-201ENST00000421604 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
AP001116.1-201ENST00000421604 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
AP001116.1-201ENST00000421604 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
AP001116.1-201ENST00000421604 BTAF1O14981 1849 aa11.21□□□□□ -0.62
AP001116.1-201ENST00000421604 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.62
AP001116.1-201ENST00000421604 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 AMOTQ4VCS5 1084 aa11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 LARP6Q9BRS8 491 aaKnown RBP11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 ITGB4P16144 1822 aa11.2□□□□□ -0.62
AP001116.1-201ENST00000421604 POTEMA6NI47 508 aa11.19□□□□□ -0.62
AP001116.1-201ENST00000421604 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
AP001116.1-201ENST00000421604 CYP27B1O15528 508 aa11.19□□□□□ -0.62
AP001116.1-201ENST00000421604 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
AP001116.1-201ENST00000421604 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
AP001116.1-201ENST00000421604 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms