RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 VEGFBP49765 207 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 SLC27A3Q5K4L6 730 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 PLEKHM2Q8IWE5 1019 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 ETNK1Q9HBU6 452 aa10.86□□□□□ -0.67
PDZD2-201ENST00000397559 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
PDZD2-201ENST00000397559 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
PDZD2-201ENST00000397559 GTF2IP78347 998 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 LYSMD3Q7Z3D4 306 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 ARID3AQ99856 593 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 ESYT1Q9BSJ8 1104 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
PDZD2-201ENST00000397559 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
PDZD2-201ENST00000397559 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
PDZD2-201ENST00000397559 GPC1P35052 558 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 PTSQ03393 145 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 PSME1Q06323 249 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 XAGE2Q96GT9 111 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 PCDHGA11Q9Y5H2 935 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 IFT140Q96RY7 1462 aa10.84□□□□□ -0.67
PDZD2-201ENST00000397559 RHOQP17081 205 aa10.83□□□□□ -0.68
PDZD2-201ENST00000397559 SCNN1DP51172 638 aa10.83□□□□□ -0.68
PDZD2-201ENST00000397559 GDF10P55107 478 aa10.83□□□□□ -0.68
PDZD2-201ENST00000397559 CENPCQ03188 943 aa10.83□□□□□ -0.68
PDZD2-201ENST00000397559 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
PDZD2-201ENST00000397559 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
PDZD2-201ENST00000397559 INHAP05111 366 aa10.81□□□□□ -0.68
PDZD2-201ENST00000397559 TRIM50Q86XT4 487 aa10.81□□□□□ -0.68
PDZD2-201ENST00000397559 GRIP2Q9C0E4 1043 aa10.81□□□□□ -0.68
PDZD2-201ENST00000397559 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
PDZD2-201ENST00000397559 HRH3Q9Y5N1 445 aa10.81□□□□□ -0.68
PDZD2-201ENST00000397559 LMOD1P29536 600 aaPredicted RBP10.8□□□□□ -0.68
PDZD2-201ENST00000397559 POU4F2Q12837 409 aa10.8□□□□□ -0.68
PDZD2-201ENST00000397559 NFX1Q12986 1120 aaKnown RBP10.8□□□□□ -0.68
PDZD2-201ENST00000397559 TLR1Q15399 786 aa10.8□□□□□ -0.68
PDZD2-201ENST00000397559 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
PDZD2-201ENST00000397559 TMEM229AB2RXF0 380 aa10.79□□□□□ -0.68
PDZD2-201ENST00000397559 CCDC155Q8N6L0 562 aa10.79□□□□□ -0.68
PDZD2-201ENST00000397559 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
PDZD2-201ENST00000397559 ABCC8Q09428 1581 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 H3BM21 787 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 PPFIA3O75145 1194 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 WFS1O76024 890 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 GTF2E1P29083 439 aaPredicted RBP10.78□□□□□ -0.68
PDZD2-201ENST00000397559 ATP1A2P50993 1020 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 CLDN10P78369 228 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 OGFOD1Q8N543 542 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 SLC16A10Q8TF71 515 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
PDZD2-201ENST00000397559 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
PDZD2-201ENST00000397559 TMEM214Q6NUQ4 689 aaKnown RBP10.77□□□□□ -0.69
PDZD2-201ENST00000397559 NPAS3Q8IXF0 933 aa10.77□□□□□ -0.69
PDZD2-201ENST00000397559 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDZD2-201ENST00000397559 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.69
PDZD2-201ENST00000397559 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
PDZD2-201ENST00000397559 SENP3-EIF4A1A0A087X0R7 540 aa10.76□□□□□ -0.69
PDZD2-201ENST00000397559 WASLO00401 505 aaPredicted RBP10.76□□□□□ -0.69
PDZD2-201ENST00000397559 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
PDZD2-201ENST00000397559 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
PDZD2-201ENST00000397559 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
PDZD2-201ENST00000397559 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
PDZD2-201ENST00000397559 ZNF594Q96JF6 807 aaPredicted RBP10.76□□□□□ -0.69
PDZD2-201ENST00000397559 EIF4G3O43432 1585 aaKnown RBP10.76□□□□□ -0.69
PDZD2-201ENST00000397559 ZNF608Q9ULD9 1512 aaPredicted RBP10.75□□□□□ -0.69
PDZD2-201ENST00000397559 SPATA31C2B4DYI2 1134 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
PDZD2-201ENST00000397559 RASA1P20936 1047 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 RFX1P22670 979 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 PHKA2P46019 1235 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 GNASQ5JWF2 1037 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 TAS1R3Q7RTX0 852 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 ZNF358Q9NW07 568 aa10.75□□□□□ -0.69
PDZD2-201ENST00000397559 SMTNP53814 917 aa10.74□□□□□ -0.69
PDZD2-201ENST00000397559 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
PDZD2-201ENST00000397559 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
PDZD2-201ENST00000397559 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
PDZD2-201ENST00000397559 BACH1O14867 736 aa10.73□□□□□ -0.69
PDZD2-201ENST00000397559 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
PDZD2-201ENST00000397559 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
PDZD2-201ENST00000397559 VRTNQ9H8Y1 702 aa10.73□□□□□ -0.69
PDZD2-201ENST00000397559 LCE2CQ5TA81 110 aa10.72□□□□□ -0.69
PDZD2-201ENST00000397559 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
PDZD2-201ENST00000397559 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
PDZD2-201ENST00000397559 IRF7Q92985 503 aa10.72□□□□□ -0.69
PDZD2-201ENST00000397559 SLC4A9Q96Q91 983 aa10.72□□□□□ -0.69
PDZD2-201ENST00000397559 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
PDZD2-201ENST00000397559 TIMMDC1Q9NPL8 285 aa10.72□□□□□ -0.69
PDZD2-201ENST00000397559 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
PDZD2-201ENST00000397559 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
PDZD2-201ENST00000397559 A6NJY4 79 aa10.71□□□□□ -0.69
PDZD2-201ENST00000397559 ITGA6P23229 1130 aa10.71□□□□□ -0.69
PDZD2-201ENST00000397559 C4orf17Q53FE4 359 aa10.71□□□□□ -0.69
PDZD2-201ENST00000397559 CDCA8Q53HL2 280 aa10.71□□□□□ -0.69
PDZD2-201ENST00000397559 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
PDZD2-201ENST00000397559 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms