RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
TRAV25-201ENST00000390454 SORBS3O60504 671 aa8.38□□□□□ -1.07
TRAV25-201ENST00000390454 GTF2F1P35269 517 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAV25-201ENST00000390454 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
TRAV25-201ENST00000390454 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
TRAV25-201ENST00000390454 RNF19BQ6ZMZ0 732 aa8.38□□□□□ -1.07
TRAV25-201ENST00000390454 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
TRAV25-201ENST00000390454 AQRO60306 1485 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAV25-201ENST00000390454 CARMIL1Q5VZK9 1371 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 ST18O60284 1047 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
TRAV25-201ENST00000390454 TSGA10IPQ3SY00 556 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 PARP2Q9UGN5 583 aa8.37□□□□□ -1.07
TRAV25-201ENST00000390454 TONSLQ96HA7 1378 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 ARID4BQ4LE39 1312 aaPredicted RBP8.36□□□□□ -1.07
TRAV25-201ENST00000390454 SNPHO15079 494 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
TRAV25-201ENST00000390454 WEE1P30291 646 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 MAPK8P45983 427 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 ATP2B2Q01814 1243 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 PLCB3Q01970 1234 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 FMR1Q06787 632 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRAV25-201ENST00000390454 USP4Q13107 963 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 DHX38Q92620 1227 aaKnown RBP8.36□□□□□ -1.07
TRAV25-201ENST00000390454 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
TRAV25-201ENST00000390454 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
TRAV25-201ENST00000390454 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 FYCO1Q9BQS8 1478 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 TREHO43280 583 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 LGR5O75473 907 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 PSMD2Q13200 908 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 FKBP5Q13451 457 aaPredicted RBP8.35□□□□□ -1.07
TRAV25-201ENST00000390454 FAM50AQ14320 339 aaKnown RBP8.35□□□□□ -1.07
TRAV25-201ENST00000390454 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 BLOC1S3Q6QNY0 202 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 METTL16Q86W50 562 aaKnown RBP8.35□□□□□ -1.07
TRAV25-201ENST00000390454 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
TRAV25-201ENST00000390454 PRDM2Q13029 1718 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 EFCAB5A4FU69 1503 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 M0R2N6 131 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 ZNF76P36508 570 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
TRAV25-201ENST00000390454 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
TRAV25-201ENST00000390454 NPR3P17342 541 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 FANCCQ00597 558 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 AAMPQ13685 434 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 LDLRAD1Q5T700 205 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 LAPTM4BQ86VI4 370 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 CASKIN1Q8WXD9 1431 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
TRAV25-201ENST00000390454 UACAQ9BZF9 1416 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 IQSEC3Q9UPP2 1182 aaPredicted RBP8.33□□□□□ -1.08
TRAV25-201ENST00000390454 PCDHGA11Q9Y5H2 935 aa8.33□□□□□ -1.08
TRAV25-201ENST00000390454 FGD5Q6ZNL6 1462 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 FOXO3O43524 673 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 DAB2P98082 770 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 TSEN2Q8NCE0 465 aaKnown RBP8.32□□□□□ -1.08
TRAV25-201ENST00000390454 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 NUDT12Q9BQG2 462 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 PRKD2Q9BZL6 878 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRAV25-201ENST00000390454 PPP4R2Q9NY27 417 aa8.32□□□□□ -1.08
TRAV25-201ENST00000390454 HFM1A2PYH4 1435 aa8.31□□□□□ -1.08
TRAV25-201ENST00000390454 DNAJA1P31689 397 aaKnown RBP8.31□□□□□ -1.08
TRAV25-201ENST00000390454 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
TRAV25-201ENST00000390454 ZNF662Q6ZS27 426 aa8.31□□□□□ -1.08
TRAV25-201ENST00000390454 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
TRAV25-201ENST00000390454 NOL8Q76FK4 1167 aaKnown RBP8.31□□□□□ -1.08
TRAV25-201ENST00000390454 SLC4A5Q9BY07 1137 aa8.31□□□□□ -1.08
TRAV25-201ENST00000390454 FMN1Q68DA7 1419 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
TRAV25-201ENST00000390454 NR1I2O75469 434 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 IGFBP4P22692 258 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 MPSTP25325 297 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 EHHADHQ08426 723 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 NBPF20Q3BBV1 942 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 SDE2Q6IQ49 451 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
TRAV25-201ENST00000390454 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRAV25-201ENST00000390454 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
TRAV25-201ENST00000390454 FGD6Q6ZV73 1430 aa8.29□□□□□ -1.08
TRAV25-201ENST00000390454 CLSTN1O94985 981 aa8.29□□□□□ -1.08
TRAV25-201ENST00000390454 ARID5AQ03989 594 aa8.29□□□□□ -1.08
TRAV25-201ENST00000390454 GMLQ99445 158 aa8.29□□□□□ -1.08
TRAV25-201ENST00000390454 ACBD3Q9H3P7 528 aa8.29□□□□□ -1.08
TRAV25-201ENST00000390454 PCF11O94913 1555 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms