RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 IQGAP2Q13576 1575 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 NPC1L1Q9UHC9 1359 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 PER1O15534 1290 aaPredicted RBP6.76□□□□□ -1.33
RFC1-202ENST00000381897 ATF7IPQ6VMQ6 1270 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 TCP11L2Q8N4U5 519 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 SYNJ2O15056 1496 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 MAGI3Q5TCQ9 1506 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 HDGFL2Q7Z4V5 671 aaPredicted RBP6.76□□□□□ -1.33
RFC1-202ENST00000381897 API5Q9BZZ5 524 aaKnown RBP6.76□□□□□ -1.33
RFC1-202ENST00000381897 SYCE3A1L190 88 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
RFC1-202ENST00000381897 CCDC157Q569K6 752 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 ZCRB1Q8TBF4 217 aaKnown RBP6.76□□□□□ -1.33
RFC1-202ENST00000381897 TRIM11Q96F44 468 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 ADGRL2O95490 1459 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 CLASP1Q7Z460 1538 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 DISP3Q9P2K9 1392 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 POLD1P28340 1107 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 ZFYVE27Q5T4F4 411 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 MFSD4BQ5TF39 518 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
RFC1-202ENST00000381897 DHX8Q14562 1220 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 TIGD1Q96MW7 591 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 FRMD4BQ9Y2L6 1034 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 PLB1Q6P1J6 1458 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 SPAG9O60271 1321 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 KDM6BO15054 1643 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-202ENST00000381897 KRT18P05783 430 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 TPM4P67936 248 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 RRP12Q5JTH9 1297 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 SREK1Q8WXA9 508 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.75□□□□□ -1.336e-8■■■■■ 98.3
RFC1-202ENST00000381897 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 OGFRQ9NZT2 677 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 USP19O94966 1318 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-202ENST00000381897 UPF1Q92900 1129 aaKnown RBP eCLIP6.75□□□□□ -1.334e-8■■■■■ 27.9
RFC1-202ENST00000381897 MRFAP1L1Q96HT8 127 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 NOLC1Q14978 699 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-202ENST00000381897 CC2D1AQ6P1N0 951 aaPredicted RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
RFC1-202ENST00000381897 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 PNMA2Q9UL42 364 aa6.75□□□□□ -1.33
RFC1-202ENST00000381897 BCORL1Q5H9F3 1711 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 SEMA3FQ13275 785 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 SHANK2Q9UPX8 1470 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 PCDHB15Q9Y5E8 787 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 ABCC11Q96J66 1382 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 MARSP56192 900 aaKnown RBP6.74□□□□□ -1.33
RFC1-202ENST00000381897 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 CCDC183Q5T5S1 534 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 TRMT2AQ8IZ69 625 aaKnown RBP6.74□□□□□ -1.33
RFC1-202ENST00000381897 ANO2Q9NQ90 1003 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 MKL2Q9ULH7 1088 aa6.74□□□□□ -1.33
RFC1-202ENST00000381897 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 CARNS1A5YM72 827 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 NUCB1Q02818 461 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 KCNA1Q09470 495 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 ZNF521Q96K83 1311 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 GOLGA6L19H0YKK7 550 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 KIF2AO00139 706 aaPredicted RBP6.73□□□□□ -1.33
RFC1-202ENST00000381897 TEX2Q8IWB9 1127 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 ACRBPQ8NEB7 543 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 TCHPQ9BT92 498 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 TRIM17Q9Y577 477 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 CCDC192P0DO97 292 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 TPD52L1Q16890 204 aaPredicted RBP6.73□□□□□ -1.33
RFC1-202ENST00000381897 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 PAXBP1Q9Y5B6 917 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 MAPK1P28482 360 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 ALDH1L2Q3SY69 923 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 ANO1Q5XXA6 986 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 KDM5DQ9BY66 1539 aa6.73□□□□□ -1.33
RFC1-202ENST00000381897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 MATR3P43243 847 aaKnown RBP eCLIP6.72□□□□□ -1.33
RFC1-202ENST00000381897 PLS1Q14651 629 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 ZNF354CQ86Y25 554 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 POLR3AO14802 1390 aaPredicted RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 IFIT2P09913 472 aaKnown RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 RIPK4P57078 832 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 KRT222Q8N1A0 295 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 IRAK4Q9NWZ3 460 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 NOB1Q9ULX3 412 aaKnown RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 SCAF11Q99590 1463 aaKnown RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 WDR62O43379 1518 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 ERC2O15083 957 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 CCP110O43303 1012 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 CCDC91Q7Z6B0 441 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 TMEM87AQ8NBN3 555 aa6.72□□□□□ -1.33
RFC1-202ENST00000381897 NAP1L2Q9ULW6 460 aaPredicted RBP6.72□□□□□ -1.33
RFC1-202ENST00000381897 DENND4BO75064 1496 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms