RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 DPEP1P16444 411 aa22.09■■□□□ 1.13
TRAPPC3-203ENST00000373163 FLT4P35916 1363 aa22.09■■□□□ 1.13
TRAPPC3-203ENST00000373163 KIAA1551Q9HCM1 1747 aa22.09■■□□□ 1.13
TRAPPC3-203ENST00000373163 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.13
TRAPPC3-203ENST00000373163 CCDC87Q9NVE4 849 aa22.08■■□□□ 1.13
TRAPPC3-203ENST00000373163 TMOD3Q9NYL9 352 aa22.08■■□□□ 1.13
TRAPPC3-203ENST00000373163 ASAP1Q9ULH1 1129 aa22.08■■□□□ 1.13
TRAPPC3-203ENST00000373163 TMF1P82094 1093 aa22.07■■□□□ 1.12
TRAPPC3-203ENST00000373163 KIF13BQ9NQT8 1826 aa22.07■■□□□ 1.12
TRAPPC3-203ENST00000373163 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
TRAPPC3-203ENST00000373163 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
TRAPPC3-203ENST00000373163 ITGB4P16144 1822 aa22.06■■□□□ 1.12
TRAPPC3-203ENST00000373163 TRAPPC3LQ5T215 181 aa22.06■■□□□ 1.12
TRAPPC3-203ENST00000373163 SPG7Q9UQ90 795 aa22.06■■□□□ 1.12
TRAPPC3-203ENST00000373163 N4BP2Q86UW6 1770 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC3-203ENST00000373163 KIF24Q5T7B8 1368 aa22.05■■□□□ 1.12
TRAPPC3-203ENST00000373163 TESK2Q96S53 571 aa22.05■■□□□ 1.12
TRAPPC3-203ENST00000373163 RTCBQ9Y3I0 505 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-203ENST00000373163 KCPQ6ZWJ8 1503 aa22.05■■□□□ 1.12
TRAPPC3-203ENST00000373163 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
TRAPPC3-203ENST00000373163 RRAGCQ9HB90 399 aa22.02■■□□□ 1.12
TRAPPC3-203ENST00000373163 ATG3Q9NT62 314 aa22.02■■□□□ 1.12
TRAPPC3-203ENST00000373163 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
TRAPPC3-203ENST00000373163 KCNA3P22001 575 aa22.01■■□□□ 1.11
TRAPPC3-203ENST00000373163 SMC1BQ8NDV3 1235 aa22.01■■□□□ 1.11
TRAPPC3-203ENST00000373163 ARHGEF1Q92888 912 aaKnown RBP22.01■■□□□ 1.11
TRAPPC3-203ENST00000373163 RNF181Q9P0P0 153 aa22.01■■□□□ 1.11
TRAPPC3-203ENST00000373163 NCAPD2Q15021 1401 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 ST20-MTHFSA0A0A6YYL1 179 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 GYS1P13807 737 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 ADRA2BP18089 450 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 DCAF5Q96JK2 942 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 PIM2Q9P1W9 311 aa22■■□□□ 1.11
TRAPPC3-203ENST00000373163 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
TRAPPC3-203ENST00000373163 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
TRAPPC3-203ENST00000373163 KDRP35968 1356 aa21.99■■□□□ 1.11
TRAPPC3-203ENST00000373163 RFC4P35249 363 aa21.98■■□□□ 1.11
TRAPPC3-203ENST00000373163 DALRD3Q5D0E6 543 aaKnown RBP21.98■■□□□ 1.11
TRAPPC3-203ENST00000373163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.11
TRAPPC3-203ENST00000373163 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
TRAPPC3-203ENST00000373163 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
TRAPPC3-203ENST00000373163 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
TRAPPC3-203ENST00000373163 PHKG2P15735 406 aa21.97■■□□□ 1.11
TRAPPC3-203ENST00000373163 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
TRAPPC3-203ENST00000373163 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
TRAPPC3-203ENST00000373163 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
TRAPPC3-203ENST00000373163 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
TRAPPC3-203ENST00000373163 PPM1GO15355 546 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC3-203ENST00000373163 RPS6KA4O75676 772 aa21.94■■□□□ 1.1
TRAPPC3-203ENST00000373163 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
TRAPPC3-203ENST00000373163 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
TRAPPC3-203ENST00000373163 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
TRAPPC3-203ENST00000373163 TNRC6CQ9HCJ0 1690 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-203ENST00000373163 EYA1Q99502 592 aa21.92■■□□□ 1.1
TRAPPC3-203ENST00000373163 ARFGEF1Q9Y6D6 1849 aa21.91■■□□□ 1.1
TRAPPC3-203ENST00000373163 ZC3H4Q9UPT8 1303 aaKnown RBP21.89■■□□□ 1.1
TRAPPC3-203ENST00000373163 CHRNA5P30532 468 aa21.89■■□□□ 1.09
TRAPPC3-203ENST00000373163 WASHC2AQ641Q2 1341 aa21.88■■□□□ 1.09
TRAPPC3-203ENST00000373163 DDR1Q08345 913 aa21.88■■□□□ 1.09
TRAPPC3-203ENST00000373163 ERVV-2B6SEH9 535 aa21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 VEGFAP15692 232 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 FKBP8Q14318 412 aa21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 SRP68Q9UHB9 627 aaKnown RBP21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 ZNF831Q5JPB2 1677 aa21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
TRAPPC3-203ENST00000373163 RASSF7Q02833 373 aa21.86■■□□□ 1.09
TRAPPC3-203ENST00000373163 USP42Q9H9J4 1324 aaKnown RBP21.85■■□□□ 1.09
TRAPPC3-203ENST00000373163 GLTPD2A6NH11 291 aa21.85■■□□□ 1.09
TRAPPC3-203ENST00000373163 PCNTO95613 3336 aa21.84■■□□□ 1.09
TRAPPC3-203ENST00000373163 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC3-203ENST00000373163 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC3-203ENST00000373163 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
TRAPPC3-203ENST00000373163 LMNB1P20700 586 aa21.83■■□□□ 1.09
TRAPPC3-203ENST00000373163 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.09
TRAPPC3-203ENST00000373163 CARD14Q9BXL6 1004 aa21.83■■□□□ 1.09
TRAPPC3-203ENST00000373163 POLRMTO00411 1230 aaKnown RBP21.82■■□□□ 1.08
TRAPPC3-203ENST00000373163 CABP4P57796 275 aa21.81■■□□□ 1.08
TRAPPC3-203ENST00000373163 ANKRD26Q9UPS8 1709 aa21.8■■□□□ 1.08
TRAPPC3-203ENST00000373163 PTCD1O75127 700 aaKnown RBP21.8■■□□□ 1.08
TRAPPC3-203ENST00000373163 CDCA8Q53HL2 280 aa21.79■■□□□ 1.08
TRAPPC3-203ENST00000373163 TM4SF1P30408 202 aa21.78■■□□□ 1.08
TRAPPC3-203ENST00000373163 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
TRAPPC3-203ENST00000373163 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
TRAPPC3-203ENST00000373163 SBF1O95248 1867 aa21.77■■□□□ 1.08
TRAPPC3-203ENST00000373163 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC3-203ENST00000373163 MYH14Q7Z406 1995 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 POTECB2RU33 542 aa21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 ZPR1O75312 459 aa21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 SLC34A2O95436 690 aa21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 USPL1Q5W0Q7 1092 aa21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 INTS5Q6P9B9 1019 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 CREBZFQ9NS37 354 aa21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 MKRN1Q9UHC7 482 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-203ENST00000373163 MTHFSP49914 203 aa21.73■■□□□ 1.07
TRAPPC3-203ENST00000373163 TTLL6Q8N841 843 aa21.73■■□□□ 1.07
TRAPPC3-203ENST00000373163 DPY19L2Q6NUT2 758 aa21.72■■□□□ 1.07
TRAPPC3-203ENST00000373163 NFKBIEO00221 500 aa21.71■■□□□ 1.07
TRAPPC3-203ENST00000373163 NFIXQ14938 502 aa21.71■■□□□ 1.07
TRAPPC3-203ENST00000373163 AMOTQ4VCS5 1084 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms