RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 C10orf67Q8IYJ2 551 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 IL25Q9H293 177 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 RSPH14Q9UHP6 348 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 MYOM1P52179 1685 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 KIAA0556O60303 1618 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 TRIM66O15016 1216 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 CCDC144BQ3MJ40 725 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 LRRN4CLQ8ND94 238 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 MBIPQ9NS73 344 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 GEMIN8Q9NWZ8 242 aaKnown RBP10.28□□□□□ -0.76
CD46-206ENST00000360212 TCHHQ07283 1943 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 MAGI1Q96QZ7 1491 aaPredicted RBP10.28□□□□□ -0.76
CD46-206ENST00000360212 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 RAD51AP2Q09MP3 1159 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD46-206ENST00000360212 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
CD46-206ENST00000360212 TOMM22Q9NS69 142 aa10.28□□□□□ -0.76
CD46-206ENST00000360212 DIAPH1O60610 1272 aaKnown RBP10.27□□□□□ -0.76
CD46-206ENST00000360212 MCCP23508 829 aa10.27□□□□□ -0.76
CD46-206ENST00000360212 ERCC6LQ2NKX8 1250 aa10.27□□□□□ -0.76
CD46-206ENST00000360212 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.76
CD46-206ENST00000360212 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.76
CD46-206ENST00000360212 PTPRTO14522 1441 aa10.27□□□□□ -0.76
CD46-206ENST00000360212 SYNJ2O15056 1496 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 STX6O43752 255 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 ZSCAN22P10073 491 aaPredicted RBP10.27□□□□□ -0.77
CD46-206ENST00000360212 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■■□□ 18.3
CD46-206ENST00000360212 ZNF446Q9NWS9 450 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 CLIP2Q9UDT6 1046 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 LIG1P18858 919 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 CUL4AQ13619 759 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 CCDC83Q8IWF9 413 aa10.27□□□□□ -0.77
CD46-206ENST00000360212 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.77
CD46-206ENST00000360212 SHANK2Q9UPX8 1470 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 PDE1AP54750 535 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 CEP85Q6P2H3 762 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 TSPYL1Q9H0U9 437 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 SMC3Q9UQE7 1217 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 F6X3S4 739 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 TYRO3Q06418 890 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 AFAP1Q8N556 730 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 YY1AP1Q9H869 796 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 CBX8Q9HC52 389 aa10.26□□□□□ -0.77
CD46-206ENST00000360212 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
CD46-206ENST00000360212 PTPN14Q15678 1187 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 NECAB1Q8N987 351 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 FUCA2Q9BTY2 467 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 LARGE1O95461 756 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 ZNF622Q969S3 477 aaKnown RBP eCLIP10.25□□□□□ -0.772e-9■□□□□ 9.2
CD46-206ENST00000360212 IL1RAPL2Q9NP60 686 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 F13A1P00488 732 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
CD46-206ENST00000360212 KRBA2Q6ZNG9 492 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 FAM200AQ8TCP9 573 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 EPC1Q9H2F5 836 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 DACT1Q9NYF0 836 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 LCMT1Q9UIC8 334 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
CD46-206ENST00000360212 LAMC1P11047 1609 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 GOLGA6L4A6NEF3 574 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 ST5P78524 1137 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 SYT10Q6XYQ8 523 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 ANKRD44Q8N8A2 993 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 PAXBP1Q9Y5B6 917 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 SYCP2Q9BX26 1530 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 RPAP1Q9BWH6 1393 aaPredicted RBP10.24□□□□□ -0.77
CD46-206ENST00000360212 ABCC4O15439 1325 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 KIF3BO15066 747 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
CD46-206ENST00000360212 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 SKIDA1Q1XH10 827 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 ERCC4Q92889 916 aaPredicted RBP10.24□□□□□ -0.77
CD46-206ENST00000360212 NUP62CLQ9H1M0 184 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 TNMDQ9H2S6 317 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 ATP10BO94823 1461 aa10.24□□□□□ -0.77
CD46-206ENST00000360212 ANKRD65E5RJM6 399 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 SEC31AO94979 1220 aaKnown RBP10.23□□□□□ -0.77
CD46-206ENST00000360212 TPM3P06753 285 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 SKILP12757 684 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 GJB2P29033 226 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 MCM2P49736 904 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 GTF2A1P52655 376 aaPredicted RBP10.23□□□□□ -0.77
CD46-206ENST00000360212 AK2P54819 239 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 CCDC34Q96HJ3 373 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 API5Q9BZZ5 524 aaKnown RBP10.23□□□□□ -0.77
CD46-206ENST00000360212 EFCC1Q9HA90 598 aa10.23□□□□□ -0.77
CD46-206ENST00000360212 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
CD46-206ENST00000360212 ZNF75DP51815 510 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms