RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 POLA1P09884 1462 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-203ENST00000358544 PTGS1P23219 599 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 IGHDP01880 384 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 TAF4BQ92750 862 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 ARID1AO14497 2285 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 TRDNQ13061 729 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 MCM6Q14566 821 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 RALYLQ86SE5 291 aaKnown RBP7.07□□□□□ -1.28
VPS13B-203ENST00000358544 LUC7LQ9NQ29 371 aaKnown RBP7.07□□□□□ -1.28
VPS13B-203ENST00000358544 TAX1BP1Q86VP1 789 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 BRMS1Q9HCU9 246 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
VPS13B-203ENST00000358544 BRWD1Q9NSI6 2320 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 HSP90AB2PQ58FF8 381 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 CCDC83Q8IWF9 413 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 TTC22Q5TAA0 569 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 CNPY2Q9Y2B0 182 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 CACNA1BQ00975 2339 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 ATP2C2O75185 946 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 MAATS1Q7Z4T9 603 aa7.07□□□□□ -1.28
VPS13B-203ENST00000358544 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 CACNA1CQ13936 2221 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 FYCO1Q9BQS8 1478 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 GOLGA6L10A0A0M3HER8 536 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 STX6O43752 255 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 ZNF526Q8TF50 670 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 SURF6O75683 361 aaKnown RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 SMC1AQ14683 1233 aaKnown RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 VPS53Q5VIR6 699 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 LRCH2Q5VUJ6 765 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 BCL2L12Q9HB09 334 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 USP48Q86UV5 1035 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 ERC1Q8IUD2 1116 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 SCLT1Q96NL6 688 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 DNAJC13O75165 2243 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 CTAGE15A4D2H0 777 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 CTAGE8P0CG41 777 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 GIMAP6Q6P9H5 292 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 CTAGE6Q86UF2 777 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 CTAGE4Q8IX94 777 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 MX1P20591 662 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 EIF5P55010 431 aaKnown RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 FAM76AQ8TAV0 307 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 OPA1O60313 960 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 MTHFSP49914 203 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 STIM1Q13586 685 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 IMMTQ16891 758 aaKnown RBP7.06□□□□□ -1.28
VPS13B-203ENST00000358544 SPECC1LQ69YQ0 1117 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 A0A1B0GUA9 196 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 SPA17Q15506 151 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 ZSWIM4Q9H7M6 989 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 DNAI1Q9UI46 699 aa7.06□□□□□ -1.28
VPS13B-203ENST00000358544 STAC3Q96MF2 364 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 HYPKQ9NX55 129 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 DNAJC21Q5F1R6 531 aaKnown RBP7.05□□□□□ -1.28
VPS13B-203ENST00000358544 FSIP1Q8NA03 581 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 ALS2CR12Q96Q35 445 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 PAIP2Q9BPZ3 127 aaKnown RBP7.05□□□□□ -1.28
VPS13B-203ENST00000358544 NCOA2Q15596 1464 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 ATP2B1P20020 1258 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 SETSIPP0DME0 302 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 CTCFLQ8NI51 663 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-203ENST00000358544 NEXNQ0ZGT2 675 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 NUTM2DQ5VT03 806 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-203ENST00000358544 EHBP1Q8NDI1 1231 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 ERBINQ96RT1 1412 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 ZNF445P59923 1031 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 VPS18Q9P253 973 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 ATP6V1AP38606 617 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 PPP1R9BQ96SB3 815 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 GNAI2P04899 355 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 EPS15P42566 896 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 NUCB1Q02818 461 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 HDXQ7Z353 690 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 MKRN1Q9UHC7 482 aaKnown RBP7.05□□□□□ -1.28
VPS13B-203ENST00000358544 KDM2BQ8NHM5 1336 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 TYRO3Q06418 890 aa7.05□□□□□ -1.28
VPS13B-203ENST00000358544 NECTIN2Q92692 538 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 YEATS4O95619 227 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 ZNF622Q969S3 477 aaKnown RBP eCLIP7.04□□□□□ -1.289e-7■■■□□ 17.7
VPS13B-203ENST00000358544 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 IFFO1Q0D2I5 559 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 AFAP1L1Q8TED9 768 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 TSPYL4Q9UJ04 414 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 KDM4AO75164 1064 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 GAS2L2Q8NHY3 880 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 RNF123Q5XPI4 1314 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 SMARCA5O60264 1052 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-203ENST00000358544 ZNF330Q9Y3S2 320 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-203ENST00000358544 CABIN1Q9Y6J0 2220 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 NUP133Q8WUM0 1156 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 PHACTR2O75167 634 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 CCT4P50991 539 aaKnown RBP7.04□□□□□ -1.28
VPS13B-203ENST00000358544 ZNF428Q96B54 188 aa7.04□□□□□ -1.28
VPS13B-203ENST00000358544 HSF2BPO75031 334 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms