RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
SMARCAL1-202ENST00000358207 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
SMARCAL1-202ENST00000358207 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.55
SMARCAL1-202ENST00000358207 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 KCNJ4P48050 445 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 MYOM1P52179 1685 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 SOX12O15370 315 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 SLC20A2Q08357 652 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 NUDT16Q96DE0 195 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 LY75O60449 1722 aa11.58□□□□□ -0.56
SMARCAL1-202ENST00000358207 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 MMP14P50281 582 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 CDCA8Q53HL2 280 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 PLEKHG2Q9H7P9 1386 aa11.57□□□□□ -0.56
SMARCAL1-202ENST00000358207 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 CDK19Q9BWU1 502 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 CRB1P82279 1406 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 ZNF831Q5JPB2 1677 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-202ENST00000358207 PSEN1P49768 467 aa11.55□□□□□ -0.56
SMARCAL1-202ENST00000358207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCAL1-202ENST00000358207 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
SMARCAL1-202ENST00000358207 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-202ENST00000358207 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
SMARCAL1-202ENST00000358207 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 BCCIPQ9P287 314 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 CICQ96RK0 1608 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 DDX11L8A8MPP1 907 aa11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 CAPN2P17655 700 aa11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-202ENST00000358207 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 PPP2R1AP30153 589 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 NLRP13Q86W25 1043 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 RALBP1Q15311 655 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 ACEP12821 1306 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 KIAA0232Q92628 1395 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 OVOS2A0A0J9YW53 1432 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 OVOS2Q6IE36 1432 aa11.53□□□□□ -0.56
SMARCAL1-202ENST00000358207 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 HS1BP3Q53T59 392 aa11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 MORC1Q86VD1 984 aa11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 MYRIPQ8NFW9 859 aa11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.56
SMARCAL1-202ENST00000358207 ZNF771Q7L3S4 317 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-202ENST00000358207 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
SMARCAL1-202ENST00000358207 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 TNS2Q63HR2 1409 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 EDC4Q6P2E9 1401 aaKnown RBP11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
SMARCAL1-202ENST00000358207 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
SMARCAL1-202ENST00000358207 BTAF1O14981 1849 aa11.5□□□□□ -0.57
SMARCAL1-202ENST00000358207 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
SMARCAL1-202ENST00000358207 TUBGCP6Q96RT7 1819 aa11.5□□□□□ -0.57
SMARCAL1-202ENST00000358207 WWC1Q8IX03 1113 aa11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 PDLIM2Q96JY6 352 aa11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 RRP7AQ9Y3A4 280 aaKnown RBP11.49□□□□□ -0.57
SMARCAL1-202ENST00000358207 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
SMARCAL1-202ENST00000358207 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
SMARCAL1-202ENST00000358207 U2AF2P26368 475 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■■□ 20.2
SMARCAL1-202ENST00000358207 TULP2O00295 520 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 BTG4Q9NY30 223 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 RTL1A6NKG5 1358 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 KIF24Q5T7B8 1368 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 IGHDP01880 384 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 MTHFSP49914 203 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 FAM196AQ6ZSG2 479 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 A0A1W2PP64 1363 aa11.47□□□□□ -0.57
SMARCAL1-202ENST00000358207 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
SMARCAL1-202ENST00000358207 DDIT3P35638 169 aa11.46□□□□□ -0.57
SMARCAL1-202ENST00000358207 BAG6P46379 1132 aa11.46□□□□□ -0.57
SMARCAL1-202ENST00000358207 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
SMARCAL1-202ENST00000358207 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms