RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ADAMTS12P58397 1594 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 LARP1BQ659C4 914 aaKnown RBP18.91■□□□□ 0.62
NPHP3-201ENST00000337331 CEP135Q66GS9 1140 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 CWC27Q6UX04 472 aaKnown RBP18.91■□□□□ 0.62
NPHP3-201ENST00000337331 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
NPHP3-201ENST00000337331 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
NPHP3-201ENST00000337331 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 TMEM51Q9NW97 253 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 PAXBP1Q9Y5B6 917 aa18.91■□□□□ 0.62
NPHP3-201ENST00000337331 H0YHG0 523 aa18.9■□□□□ 0.62
NPHP3-201ENST00000337331 SMARCA5O60264 1052 aaPredicted RBP18.9■□□□□ 0.62
NPHP3-201ENST00000337331 DISP3Q9P2K9 1392 aa18.9■□□□□ 0.62
NPHP3-201ENST00000337331 LMAN1P49257 510 aa18.9■□□□□ 0.62
NPHP3-201ENST00000337331 KRT85P78386 507 aa18.9■□□□□ 0.62
NPHP3-201ENST00000337331 IRX5P78411 483 aaPredicted RBP18.9■□□□□ 0.62
NPHP3-201ENST00000337331 ZNF397Q8NF99 534 aaPredicted RBP18.89■□□□□ 0.62
NPHP3-201ENST00000337331 CCDC191Q8NCU4 936 aa18.89■□□□□ 0.61
NPHP3-201ENST00000337331 ALDH1L2Q3SY69 923 aa18.89■□□□□ 0.61
NPHP3-201ENST00000337331 CCDC70Q6NSX1 233 aa18.89■□□□□ 0.61
NPHP3-201ENST00000337331 BLOC1S2Q6QNY1 142 aa18.89■□□□□ 0.61
NPHP3-201ENST00000337331 TNMDQ9H2S6 317 aa18.89■□□□□ 0.61
NPHP3-201ENST00000337331 PTGS1P23219 599 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 FYB1O15117 783 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 STK38Q15208 465 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 PDILTQ8N807 584 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 AACSQ86V21 672 aa18.88■□□□□ 0.61
NPHP3-201ENST00000337331 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
NPHP3-201ENST00000337331 NME9Q86XW9 330 aa18.87■□□□□ 0.61
NPHP3-201ENST00000337331 NUTM1Q86Y26 1132 aa18.87■□□□□ 0.61
NPHP3-201ENST00000337331 ABCC11Q96J66 1382 aa18.87■□□□□ 0.61
NPHP3-201ENST00000337331 MYL6BP14649 208 aa18.87■□□□□ 0.61
NPHP3-201ENST00000337331 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 SMC2O95347 1197 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 SMTNL1A8MU46 457 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 TTLL5Q6EMB2 1281 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 TXLNBQ8N3L3 684 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 PKP1Q13835 747 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 CLIP2Q9UDT6 1046 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 CKAP2LQ8IYA6 745 aa18.86■□□□□ 0.61
NPHP3-201ENST00000337331 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
NPHP3-201ENST00000337331 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
NPHP3-201ENST00000337331 F6X3S4 739 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 NUP62CLQ9H1M0 184 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
NPHP3-201ENST00000337331 IBSPP21815 317 aaPredicted RBP18.85■□□□□ 0.61
NPHP3-201ENST00000337331 KRBA2Q6ZNG9 492 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 USP48Q86UV5 1035 aa18.85■□□□□ 0.61
NPHP3-201ENST00000337331 PROSER2Q86WR7 435 aaPredicted RBP18.85■□□□□ 0.61
NPHP3-201ENST00000337331 ME1P48163 572 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 RDXP35241 583 aaKnown RBP18.84■□□□□ 0.61
NPHP3-201ENST00000337331 IDI1Q13907 227 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 ZNF396Q96N95 335 aaPredicted RBP18.84■□□□□ 0.61
NPHP3-201ENST00000337331 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 LRRFIP2Q9Y608 721 aaKnown RBP18.84■□□□□ 0.61
NPHP3-201ENST00000337331 MX1P20591 662 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 CALRP27797 417 aaKnown RBP18.84■□□□□ 0.61
NPHP3-201ENST00000337331 MAP3K11Q16584 847 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
NPHP3-201ENST00000337331 DRC1Q96MC2 740 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 MTMR7Q9Y216 660 aa18.84■□□□□ 0.61
NPHP3-201ENST00000337331 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.61
NPHP3-201ENST00000337331 FERMT3Q86UX7 667 aa18.83■□□□□ 0.61
NPHP3-201ENST00000337331 GPT2Q8TD30 523 aa18.83■□□□□ 0.6
NPHP3-201ENST00000337331 XBP1P17861 261 aa18.82■□□□□ 0.6
NPHP3-201ENST00000337331 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
NPHP3-201ENST00000337331 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
NPHP3-201ENST00000337331 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 HDAC1Q13547 482 aaPredicted RBP18.81■□□□□ 0.6
NPHP3-201ENST00000337331 PER1O15534 1290 aaPredicted RBP18.81■□□□□ 0.6
NPHP3-201ENST00000337331 NUCB1Q02818 461 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 URI1O94763 535 aaPredicted RBP18.81■□□□□ 0.6
NPHP3-201ENST00000337331 KIF1BPQ96EK5 621 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
NPHP3-201ENST00000337331 CTR9Q6PD62 1173 aa18.8■□□□□ 0.6
NPHP3-201ENST00000337331 SPATA32Q96LK8 384 aa18.8■□□□□ 0.6
NPHP3-201ENST00000337331 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
NPHP3-201ENST00000337331 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
NPHP3-201ENST00000337331 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
NPHP3-201ENST00000337331 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
NPHP3-201ENST00000337331 MNAT1P51948 309 aa18.8■□□□□ 0.6
NPHP3-201ENST00000337331 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
NPHP3-201ENST00000337331 BRMS1Q9HCU9 246 aa18.8■□□□□ 0.6
NPHP3-201ENST00000337331 CNNM1Q9NRU3 951 aa18.79■□□□□ 0.6
NPHP3-201ENST00000337331 DHX37Q8IY37 1157 aaKnown RBP18.79■□□□□ 0.6
NPHP3-201ENST00000337331 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
NPHP3-201ENST00000337331 ELF2Q15723 593 aa18.79■□□□□ 0.6
NPHP3-201ENST00000337331 CLGNO14967 610 aa18.79■□□□□ 0.6
NPHP3-201ENST00000337331 CABP4P57796 275 aa18.79■□□□□ 0.6
NPHP3-201ENST00000337331 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
NPHP3-201ENST00000337331 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 CCDC102AQ96A19 550 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms