RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 CFAP100Q494V2 611 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
SCN5A-202ENST00000333535 CDK19Q9BWU1 502 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 STARD3NLO95772 234 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
SCN5A-202ENST00000333535 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCN5A-202ENST00000333535 FKBP15Q5T1M5 1219 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 PYM1Q9BRP8 204 aaKnown RBP13.72□□□□□ -0.21
SCN5A-202ENST00000333535 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
SCN5A-202ENST00000333535 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
SCN5A-202ENST00000333535 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
SCN5A-202ENST00000333535 MATR3P43243 847 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCN5A-202ENST00000333535 CCDC150Q8NCX0 1101 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
SCN5A-202ENST00000333535 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.21
SCN5A-202ENST00000333535 ZNF76P36508 570 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 FAM193AP78312 1265 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 TSG101Q99816 390 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
SCN5A-202ENST00000333535 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.21
SCN5A-202ENST00000333535 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 PPM1EQ8WY54 764 aa13.71□□□□□ -0.21
SCN5A-202ENST00000333535 IGHMBP2P38935 993 aaKnown RBP13.71□□□□□ -0.22
SCN5A-202ENST00000333535 AACSQ86V21 672 aa13.71□□□□□ -0.22
SCN5A-202ENST00000333535 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.22
SCN5A-202ENST00000333535 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCN5A-202ENST00000333535 STK3Q13188 491 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
SCN5A-202ENST00000333535 NEBLO76041 1014 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 FCHSD2O94868 740 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 NF2P35240 595 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
SCN5A-202ENST00000333535 RBM5P52756 815 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCN5A-202ENST00000333535 DDX12PQ92771 950 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
SCN5A-202ENST00000333535 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 SEPT11Q9NVA2 429 aaKnown RBP13.69□□□□□ -0.22
SCN5A-202ENST00000333535 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 SYCE3A1L190 88 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
SCN5A-202ENST00000333535 TROQ12816 1431 aaPredicted RBP13.69□□□□□ -0.22
SCN5A-202ENST00000333535 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
SCN5A-202ENST00000333535 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
SCN5A-202ENST00000333535 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
SCN5A-202ENST00000333535 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
SCN5A-202ENST00000333535 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 PAXBP1Q9Y5B6 917 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 KIF20AO95235 890 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 TUBB4BP68371 445 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 MYL6BP14649 208 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 ANAPC15P60006 121 aa13.68□□□□□ -0.22
SCN5A-202ENST00000333535 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
SCN5A-202ENST00000333535 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
SCN5A-202ENST00000333535 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
SCN5A-202ENST00000333535 NESP48681 1621 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
SCN5A-202ENST00000333535 SPATA24Q86W54 205 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 EHBP1Q8NDI1 1231 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 ZNF644Q9H582 1327 aaPredicted RBP13.67□□□□□ -0.22
SCN5A-202ENST00000333535 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 SIL1Q9H173 461 aa13.67□□□□□ -0.22
SCN5A-202ENST00000333535 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
SCN5A-202ENST00000333535 ALS2CR12Q96Q35 445 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 ERICH4A6NGS2 130 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
SCN5A-202ENST00000333535 STK11IPQ8N1F8 1099 aa13.66□□□□□ -0.22
SCN5A-202ENST00000333535 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCN5A-202ENST00000333535 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
SCN5A-202ENST00000333535 BCAR3O75815 825 aa13.65□□□□□ -0.22
SCN5A-202ENST00000333535 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms