RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
PKNOX1-201ENST00000291547 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
PKNOX1-201ENST00000291547 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 ARHGEF12Q9NZN5 1544 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 IBSPP21815 317 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 ANKRD1Q15327 319 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
PKNOX1-201ENST00000291547 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 MLH3Q9UHC1 1453 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
PKNOX1-201ENST00000291547 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 C14orf93Q9H972 538 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.61□□□□□ -0.395e-8■■■■■ 30.4
PKNOX1-201ENST00000291547 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 MTHFSP49914 203 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 GNAI2P04899 355 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 PSME1Q06323 249 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
PKNOX1-201ENST00000291547 TRERF1Q96PN7 1200 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 CGNQ9P2M7 1197 aaKnown RBP12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 KDM6BO15054 1643 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 SYCE3A1L190 88 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 TAF4BQ92750 862 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
PKNOX1-201ENST00000291547 SCAF11Q99590 1463 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 BCAR3O75815 825 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 GOLGA6L10A0A0M3HER8 536 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 ATF3P18847 181 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 KIAA1328Q86T90 577 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
PKNOX1-201ENST00000291547 SMTNL1A8MU46 457 aa12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■■■■□ 21.8
PKNOX1-201ENST00000291547 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 SEPT11Q9NVA2 429 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
PKNOX1-201ENST00000291547 GBP2P32456 591 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
PKNOX1-201ENST00000291547 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 POLR3GO15318 223 aaPredicted RBP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 CLGNO14967 610 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
PKNOX1-201ENST00000291547 MAP4K4O95819 1239 aaPredicted RBP12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 JAKMIP1Q96N16 626 aaKnown RBP12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
PKNOX1-201ENST00000291547 BMP2KQ9NSY1 1161 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms