RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 SPAG1Q07617 926 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 LAMC3Q9Y6N6 1575 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 ERCC6LQ2NKX8 1250 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 MEX3CQ5U5Q3 659 aaKnown RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 CDK5RAP3Q96JB5 506 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 ZNF652Q9Y2D9 606 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 G3BP1Q13283 466 aaKnown RBP eCLIP6.14□□□□□ -1.43
KRR1-201ENST00000229214 TPRP12270 2363 aaKnown RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 ZBTB7CA1YPR0 619 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 GBP1P32455 592 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 RIPPLY1Q0D2K3 151 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 NAP1L3Q99457 506 aaPredicted RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 CCDC38Q502W7 563 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 HSP90AB3PQ58FF7 597 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 CTAGE1Q96RT6 745 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 RNF41Q9H4P4 317 aaPredicted RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 NESP48681 1621 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 ACTN2P35609 894 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 CCDC50Q8IVM0 306 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 TMTC2Q8N394 836 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 ARHGAP5Q13017 1502 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 CFAP74Q9C0B2 1584 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 TRIM6-TRIM34B2RNG4 842 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 PPP2R5BQ15173 497 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 MAP3K21Q5TCX8 1036 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 CADPSQ9ULU8 1353 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 IFIT2P09913 472 aaKnown RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 KRT83P78385 493 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 CAPZA3Q96KX2 299 aa6.14□□□□□ -1.43
KRR1-201ENST00000229214 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
KRR1-201ENST00000229214 AMPHP49418 695 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 GBP6Q6ZN66 633 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 INSRP06213 1382 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 EPRSP07814 1512 aaKnown RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 MNAT1P51948 309 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 HOOK2Q96ED9 719 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 CRACR2AQ9BSW2 395 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 U2AF1L5P0DN76 240 aaPredicted RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.43
KRR1-201ENST00000229214 PABPN1Q86U42 306 aaKnown RBP eCLIP6.13□□□□□ -1.43
KRR1-201ENST00000229214 CUL5Q93034 780 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 SEPT6Q14141 434 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 C16orf45Q96MC5 204 aaPredicted RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 SDF4Q9BRK5 362 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 ATP5DP30049 168 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 KRT85P78386 507 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 NUTM1Q86Y26 1132 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 NSRP1Q9H0G5 558 aaKnown RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 SSX2IPQ9Y2D8 614 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 APOBRQ0VD83 1088 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 SF3B2Q13435 895 aaKnown RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 SH2B1Q9NRF2 756 aaPredicted RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 DMRT2Q9Y5R5 561 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 CCDC148Q8NFR7 591 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 MYH11P35749 1972 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 F8W8V4 182 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 NAA16Q6N069 864 aaPredicted RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 GPATCH11Q8N954 259 aa6.13□□□□□ -1.43
KRR1-201ENST00000229214 PRPF31Q8WWY3 499 aaKnown RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 FRAT1Q92837 279 aaPredicted RBP6.13□□□□□ -1.43
KRR1-201ENST00000229214 KIRREL3Q8IZU9 778 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 HOXC8P31273 242 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 ARMC9Q7Z3E5 817 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 SMC3Q9UQE7 1217 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 AKAP2Q9Y2D5 859 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 DCAF11Q8TEB1 546 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 KAT6AQ92794 2004 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 ITPRIPQ8IWB1 547 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 CALR3Q96L12 384 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 PSMA4P25789 261 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 ENOX2Q16206 610 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 CSRNP2Q9H175 543 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 DNAJC8O75937 253 aaPredicted RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 NCBP3Q53F19 620 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 PAXBP1Q9Y5B6 917 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 APC2O95996 2303 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 BUB1BO60566 1050 aaPredicted RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 HSPA5P11021 654 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 ATP2A2P16615 1042 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 STMN1P16949 149 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 TSNARE1Q96NA8 513 aa6.12□□□□□ -1.43
KRR1-201ENST00000229214 PUS7Q96PZ0 661 aaKnown RBP6.12□□□□□ -1.43
KRR1-201ENST00000229214 EIF2S2P20042 333 aaKnown RBP6.11□□□□□ -1.43
KRR1-201ENST00000229214 RASSF2P50749 326 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 AFAP1L2Q8N4X5 818 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 CCDC77Q9BR77 488 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 CCDC30Q5VVM6 783 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 RBM33Q96EV2 1170 aaKnown RBP6.11□□□□□ -1.43
KRR1-201ENST00000229214 MIS12Q9H081 205 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 NAP1L4Q99733 375 aaKnown RBP6.11□□□□□ -1.43
KRR1-201ENST00000229214 PPP1R12CQ9BZL4 782 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 CALM1P0DP23 149 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 CALM2P0DP24 149 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 CALM3P0DP25 149 aa6.11□□□□□ -1.43
KRR1-201ENST00000229214 RPGRIP1Q96KN7 1286 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms