RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 OXCT2Q9BYC2 517 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-201ENST00000216414 RRAGCQ9HB90 399 aa6.93□□□□□ -1.3
CDKN3-201ENST00000216414 GPAMQ9HCL2 828 aa6.93□□□□□ -1.3
CDKN3-201ENST00000216414 PHKA2P46019 1235 aa6.92□□□□□ -1.3
CDKN3-201ENST00000216414 WDR44Q5JSH3 913 aa6.92□□□□□ -1.3
CDKN3-201ENST00000216414 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
CDKN3-201ENST00000216414 NDUFB9Q9Y6M9 179 aa6.92□□□□□ -1.3
CDKN3-201ENST00000216414 PIK3R2O00459 728 aa6.91□□□□□ -1.3
CDKN3-201ENST00000216414 SNRPNP63162 240 aaKnown RBP6.91□□□□□ -1.3
CDKN3-201ENST00000216414 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-201ENST00000216414 GNRH1P01148 92 aa6.9□□□□□ -1.3
CDKN3-201ENST00000216414 IL2RAP01589 272 aa6.9□□□□□ -1.3
CDKN3-201ENST00000216414 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-201ENST00000216414 CENPCQ03188 943 aa6.9□□□□□ -1.3
CDKN3-201ENST00000216414 ZSCAN10Q96SZ4 725 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-201ENST00000216414 ESYT1Q9BSJ8 1104 aa6.9□□□□□ -1.3
CDKN3-201ENST00000216414 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-201ENST00000216414 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
CDKN3-201ENST00000216414 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
CDKN3-201ENST00000216414 MTMR14Q8NCE2 650 aa6.89□□□□□ -1.31
CDKN3-201ENST00000216414 BANK1Q8NDB2 785 aa6.89□□□□□ -1.31
CDKN3-201ENST00000216414 CDCA7Q9BWT1 371 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-201ENST00000216414 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
CDKN3-201ENST00000216414 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 APBB1O00213 710 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 GPR37L1O60883 481 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 GNASQ5JWF2 1037 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 CCDC85AQ96PX6 553 aaPredicted RBP6.88□□□□□ -1.31
CDKN3-201ENST00000216414 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 GDF2Q9UK05 429 aaPredicted RBP6.88□□□□□ -1.31
CDKN3-201ENST00000216414 PHF24Q9UPV7 400 aa6.88□□□□□ -1.31
CDKN3-201ENST00000216414 THBS1P07996 1170 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 COL8A1P27658 744 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 PGBD3Q8N328 593 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 RUBCNLQ9H714 662 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 SNRKQ9NRH2 765 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 CEP126Q9P2H0 1117 aa6.87□□□□□ -1.31
CDKN3-201ENST00000216414 SHISA8B8ZZ34 492 aa6.86□□□□□ -1.31
CDKN3-201ENST00000216414 AMPD1P23109 780 aa6.86□□□□□ -1.31
CDKN3-201ENST00000216414 EDARADDQ8WWZ3 215 aa6.86□□□□□ -1.31
CDKN3-201ENST00000216414 KLRG1Q96E93 195 aa6.86□□□□□ -1.31
CDKN3-201ENST00000216414 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
CDKN3-201ENST00000216414 SOCS7O14512 581 aa6.85□□□□□ -1.31
CDKN3-201ENST00000216414 C4orf17Q53FE4 359 aa6.85□□□□□ -1.31
CDKN3-201ENST00000216414 ESCO1Q5FWF5 840 aa6.85□□□□□ -1.31
CDKN3-201ENST00000216414 MSX1P28360 303 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 EFHC2Q5JST6 749 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-201ENST00000216414 DOLKQ9UPQ8 538 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 HRH3Q9Y5N1 445 aa6.84□□□□□ -1.31
CDKN3-201ENST00000216414 C1QTNF9BB2RNN3 333 aa6.83□□□□□ -1.32
CDKN3-201ENST00000216414 STAU1O95793 577 aaKnown RBP6.83□□□□□ -1.32
CDKN3-201ENST00000216414 BMP4P12644 408 aa6.83□□□□□ -1.32
CDKN3-201ENST00000216414 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-201ENST00000216414 LBRQ14739 615 aaKnown RBP6.83□□□□□ -1.32
CDKN3-201ENST00000216414 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
CDKN3-201ENST00000216414 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-201ENST00000216414 ABHD17AQ96GS6 310 aa6.83□□□□□ -1.32
CDKN3-201ENST00000216414 GNB5O14775 395 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 UBAP2LQ14157 1087 aaKnown RBP6.82□□□□□ -1.32
CDKN3-201ENST00000216414 TLR1Q15399 786 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 TSGA10IPQ3SY00 556 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 SLFNL1Q499Z3 407 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 ZMYM1Q5SVZ6 1142 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 SEMA6BQ9H3T3 888 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 ETNK1Q9HBU6 452 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 ATXN7L1Q9ULK2 861 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-201ENST00000216414 TBC1D2BQ9UPU7 963 aa6.82□□□□□ -1.32
CDKN3-201ENST00000216414 FGFR3P22607 806 aa6.81□□□□□ -1.32
CDKN3-201ENST00000216414 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDKN3-201ENST00000216414 USP4Q13107 963 aa6.81□□□□□ -1.32
CDKN3-201ENST00000216414 LINC00114Q6XXX2 140 aa6.81□□□□□ -1.32
CDKN3-201ENST00000216414 CD163Q86VB7 1156 aa6.81□□□□□ -1.32
CDKN3-201ENST00000216414 SUV39H2Q9H5I1 410 aa6.81□□□□□ -1.32
CDKN3-201ENST00000216414 NOP53Q9NZM5 478 aaKnown RBP6.81□□□□□ -1.32
CDKN3-201ENST00000216414 C2CD2LO14523 706 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 BNIP3LO60238 219 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 PLA2G4AP47712 749 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 PPARGC1BQ86YN6 1023 aaKnown RBP6.8□□□□□ -1.32
CDKN3-201ENST00000216414 RNF135Q8IUD6 432 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 GGA1Q9UJY5 639 aa6.8□□□□□ -1.32
CDKN3-201ENST00000216414 CTBSQ01459 385 aa6.79□□□□□ -1.32
CDKN3-201ENST00000216414 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
CDKN3-201ENST00000216414 KRTAP1-3Q8IUG1 177 aa6.79□□□□□ -1.32
CDKN3-201ENST00000216414 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 DOC2BQ14184 412 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 SLCO4C1Q6ZQN7 724 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 SIRT1Q96EB6 747 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 CRISPLD1Q9H336 500 aa6.78□□□□□ -1.32
CDKN3-201ENST00000216414 CHRNA4P43681 627 aa6.77□□□□□ -1.33
CDKN3-201ENST00000216414 GDF10P55107 478 aa6.77□□□□□ -1.33
CDKN3-201ENST00000216414 FIGNL1Q6PIW4 674 aa6.77□□□□□ -1.33
CDKN3-201ENST00000216414 AIDAQ96BJ3 306 aa6.77□□□□□ -1.33
CDKN3-201ENST00000216414 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms