RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 Slc4a10Q5DTL9 1118 aa16.46■□□□□ 0.23
Smc6-208ENSMUST00000218866 Ccne1Q61457 408 aa16.46■□□□□ 0.23
Smc6-208ENSMUST00000218866 Dhx30Q99PU8 1217 aaKnown RBP16.46■□□□□ 0.23
Smc6-208ENSMUST00000218866 MsnP26041 577 aaKnown RBP16.46■□□□□ 0.22
Smc6-208ENSMUST00000218866 Polr3gQ6NXY9 223 aa16.45■□□□□ 0.22
Smc6-208ENSMUST00000218866 Cdc42bpgQ80UW5 1551 aa16.45■□□□□ 0.22
Smc6-208ENSMUST00000218866 Mad1l1Q9WTX8 717 aaKnown RBP16.45■□□□□ 0.22
Smc6-208ENSMUST00000218866 Cbx1P83917 185 aaKnown RBP16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Anp32cQ64G17 123 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Yeats2Q3TUF7 1407 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Tecpr2Q3UH45 1423 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Topbp1Q6ZQF0 1515 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Atp6v1dP57746 247 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Zbtb45Q52KG4 520 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 ScaperF8VQ70 1398 aaKnown RBP16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Knl1Q66JQ7 1612 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 PtprmP28828 1452 aa16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Elmsan1E9Q2I4 1089 aaKnown RBP16.44■□□□□ 0.22
Smc6-208ENSMUST00000218866 Samd1D3YXK1 519 aa16.43■□□□□ 0.22
Smc6-208ENSMUST00000218866 CgnP59242 1191 aa16.43■□□□□ 0.22
Smc6-208ENSMUST00000218866 Glipr1l2Q9CQ35 332 aa16.43■□□□□ 0.22
Smc6-208ENSMUST00000218866 Depdc5P61460 1591 aa16.43■□□□□ 0.22
Smc6-208ENSMUST00000218866 Mdc1Q5PSV9 1707 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Brpf1B2RRD7 1212 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Nom1Q3UFM5 854 aaKnown RBP16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 KinQ8K339 391 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Mmp8O70138 465 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Map3k13Q1HKZ5 959 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Cabp4Q8VHC5 271 aa16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Rbm42Q91V81 474 aaKnown RBP16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 HnrnpmQ9D0E1 729 aaKnown RBP16.42■□□□□ 0.22
Smc6-208ENSMUST00000218866 Ap3b2Q9JME5 1082 aa16.41■□□□□ 0.22
Smc6-208ENSMUST00000218866 Wdr78E9PYY5 807 aa16.41■□□□□ 0.22
Smc6-208ENSMUST00000218866 Gjb2Q00977 226 aa16.41■□□□□ 0.22
Smc6-208ENSMUST00000218866 Ptgs1P22437 602 aa16.41■□□□□ 0.22
Smc6-208ENSMUST00000218866 Synj2Q9D2G5 1434 aa16.4■□□□□ 0.22
Smc6-208ENSMUST00000218866 Tnnt2P50752 301 aa16.4■□□□□ 0.22
Smc6-208ENSMUST00000218866 NpatQ8BMA5 1420 aa16.4■□□□□ 0.22
Smc6-208ENSMUST00000218866 Ccar2Q8VDP4 922 aaKnown RBP16.4■□□□□ 0.22
Smc6-208ENSMUST00000218866 Smc3Q9CW03 1217 aaKnown RBP16.4■□□□□ 0.22
Smc6-208ENSMUST00000218866 Atp8b2P98199 1209 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Phf23Q8BSN5 401 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Tceanc2Q8R2M0 207 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Znf541Q0GGX2 1363 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Utp18Q5SSI6 552 aaKnown RBP16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Unc5clQ6R653 518 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 DpydQ8CHR6 1025 aa16.39■□□□□ 0.21
Smc6-208ENSMUST00000218866 Smarce1O54941 411 aaKnown RBP16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Snx13Q6PHS6 957 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Sf3a1Q8K4Z5 791 aaKnown RBP16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ift172Q6VH22 1749 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Hvcn1Q3U2S8 269 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Mmel1Q9JLI3 765 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 CebpzP53569 1052 aaKnown RBP16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 EspnlQ3UYR4 1005 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Rps6ka5Q8C050 863 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Stx6Q9JKK1 255 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Mx2Q9WVP9 655 aa16.38■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ubap1lG3UW59 384 aa16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Chpf2Q3UU43 768 aa16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ints3Q7TPD0 1041 aaKnown RBP16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Cfap73J3QPZ5 306 aa16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Zfp51Q3U4L8 781 aa16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Rufy3Q9D394 469 aa16.37■□□□□ 0.21
Smc6-208ENSMUST00000218866 Mcmdc2E9Q956 681 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Bcl2l13P59017 434 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Zfp804bA0A0G2JGH6 1343 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Nckap5lQ6GQX2 1323 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ccdc173A0JLY1 547 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Lekr1B2RVN1 116 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ccdc178Q8CDV0 866 aa16.36■□□□□ 0.21
Smc6-208ENSMUST00000218866 Atp10aO54827 1508 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 CatipB9EKE5 520 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ncbp1Q3UYV9 790 aaKnown RBP16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Exoc6bA6H5Z3 810 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Tlr7P58681 1050 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Eya1P97767 591 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Nol8Q3UHX0 1147 aaKnown RBP16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Tsr2Q8C8T8 191 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Brf1Q8CFK2 676 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Grpel1Q99LP6 217 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Akap12Q9WTQ5 1684 aa16.35■□□□□ 0.21
Smc6-208ENSMUST00000218866 Gm21190A0A0G2JGJ6 266 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 NktrP30415 1453 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Cd22P35329 862 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Zap70P43404 618 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Ccdc66Q6NS45 935 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Kank4Q6P9J5 1016 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Zscan22Q8BGS5 496 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 Anapc15P60007 132 aa16.34■□□□□ 0.21
Smc6-208ENSMUST00000218866 4930407I10RikD3Z5T8 1512 aa16.33■□□□□ 0.21
Smc6-208ENSMUST00000218866 Cnnm3Q32NY4 713 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Kiaa0754Q69ZZ9 979 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Cyp2d12Q8BVD2 504 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 SrrtQ99MR6 875 aaKnown RBP16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Abca14E9Q8F8 1683 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Cfdp1O88271 295 aaKnown RBP16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Trim30aP15533 496 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Strn4P58404 760 aa16.33■□□□□ 0.2
Smc6-208ENSMUST00000218866 Zpr1Q62384 459 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms