RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Btbd11Q6GQW0 1109 aa29.74■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 RgmbQ7TQ33 436 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 4930572O03RikQ8C5Y0 211 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Tmc1Q8R4P5 757 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Pard3Q99NH2 1333 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Aifm3Q3TY86 605 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Zranb3Q6NZP1 1069 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Slx1bQ8BX32 270 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Ipo9Q91YE6 1041 aa29.73■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Phlpp2Q8BXA7 1320 aa29.72■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Cetn4Q8K4K1 168 aa29.72■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Pnpla7A2AJ88 1352 aa29.72■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Tm6sf1P58749 370 aa29.71■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Sf3b2Q3UJB0 878 aaKnown RBP29.71■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Chmp7Q8R1T1 451 aa29.71■■■□□ 2.35
Ssbp4-205ENSMUST00000210369 Shank2Q80Z38 1476 aa29.7■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Cyp2d12Q8BVD2 504 aa29.7■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Pdzd9Q9D9M4 266 aa29.7■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Phkg2Q9DB30 406 aa29.7■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 LifrP42703 1092 aa29.68■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 PsapQ61207 557 aaKnown RBP29.68■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Tnrc6cQ3UHC0 1690 aaKnown RBP29.68■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Fam83gQ5SWY7 812 aa29.68■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Cgnl1Q6AW69 1298 aa29.68■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Trim30dE9PWL0 497 aa29.67■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Fgd1P52734 960 aa29.67■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Tmem119Q8R138 280 aa29.67■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Zeb2Q9R0G7 1215 aa29.67■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 ScaperF8VQ70 1398 aaKnown RBP29.67■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Ccdc183A2AJB1 534 aa29.66■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 CoilQ5SU73 570 aa29.66■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Ubr2Q6WKZ8 1755 aa29.66■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Ipo8Q7TMY7 1010 aa29.66■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Ssfa2Q922B9 1252 aa29.66■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Trim27Q62158 513 aa29.64■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Disp3A3KFU9 1347 aa29.64■■■□□ 2.34
Ssbp4-205ENSMUST00000210369 Eif3bQ8JZQ9 803 aaKnown RBP29.64■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Brd1E9PZ26 1189 aaKnown RBP29.63■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Zpr1Q62384 459 aa29.63■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Cc2d1aQ8K1A6 943 aa29.63■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Morc2aQ69ZX6 1030 aa29.62■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 KnstrnQ9D9Z1 312 aaKnown RBP29.62■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Prkar2bP31324 416 aa29.61■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Ccdc129Q14B48 1034 aa29.61■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Sgsm1Q8BPQ7 1093 aa29.6■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Echdc1Q9D9V3 322 aa29.6■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Cacna1sQ02789 1880 aa29.6■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Tnnt1O88346 262 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Nkx2-3P97334 362 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Aplp1Q03157 653 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Aldh8a1Q8BH00 487 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Stk36Q69ZM6 1316 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Triml2E9PW10 424 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Eif4g2Q62448 906 aaKnown RBP29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Atg3Q9CPX6 314 aa29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 CarsQ9ER72 831 aaKnown RBP29.59■■■□□ 2.33
Ssbp4-205ENSMUST00000210369 Ak7Q9D2H2 614 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Taf7Q9R1C0 341 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Gnai2P08752 355 aaKnown RBP29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 4930567H17RikQ3V0K5 233 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Kif18aQ91WD7 886 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 GckrQ91X44 587 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Gcc1Q9D4H2 778 aa29.57■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Mcm2P97310 904 aa29.56■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Fer1l6E0CZ42 1862 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Kat6bQ8BRB7 1872 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Fam13aQ8BGI4 693 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Ppm1gQ61074 542 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Pm20d1Q8C165 503 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Fam50bQ9WTJ8 334 aa29.55■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Ltbp1Q8CG19 1712 aa29.53■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Hoxa7P02830 229 aa29.53■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Asic4Q7TNS7 539 aa29.53■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Ccdc27Q3V036 639 aa29.52■■■□□ 2.32
Ssbp4-205ENSMUST00000210369 Sart3Q9JLI8 962 aaKnown RBP29.51■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Fkbp4P30416 458 aa29.5■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Akap11E9Q777 1895 aa29.5■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Ccdc155Q80VJ8 648 aa29.5■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Flt4P35917 1363 aa29.5■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Iqsec3Q3TES0 1195 aa29.49■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Myt1Q8CFC2 1127 aa29.49■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 TefQ9JLC6 301 aa29.49■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Speer4bQ9D9F7 267 aa29.48■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Cyp2d11P24457 504 aa29.47■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Slc5a1Q8C3K6 665 aa29.47■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Irx6Q9ER75 438 aa29.47■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Eif3aP23116 1344 aaKnown RBP29.45■■■□□ 2.31
Ssbp4-205ENSMUST00000210369 Mast2Q60592 1734 aa29.45■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Wdr63B2RY71 923 aa29.44■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Hsp90ab1P11499 724 aaKnown RBP29.44■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 MpndQ3TV65 487 aa29.44■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Tbc1d32Q3URV1 1296 aa29.44■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 SympkQ80X82 1284 aa29.44■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm21663A0A0G2JE01 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm7361D3Z6R1 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 5031410I06RikE9Q4E0 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm1979E9QAN3 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm5862K7N5V5 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm10220K7N660 267 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Adcy9P51830 1353 aa29.43■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms