RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Srgap3Q812A2 1099 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Slc4a10Q5DTL9 1118 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Speer4bQ9D9F7 267 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 TefQ9JLC6 301 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cyp46a1Q9WVK8 500 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Ubr1O70481 1757 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Pnmal2G3X9N3 661 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 GorabQ8BRM2 368 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Eif3bQ8JZQ9 803 aaKnown RBP11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Exoc6bA6H5Z3 810 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Eif4a1P60843 406 aaKnown RBP11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Ppp1r37Q8BKR5 712 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Acsbg1Q99PU5 721 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Map2P20357 1828 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Wdr63B2RY71 923 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cnnm1Q0GA42 951 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cwc27Q3TKY6 469 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cadps2Q8BYR5 1297 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Tm6sf1P58749 370 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Abcc12Q80WJ6 1366 aa11.79□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Echdc1Q9D9V3 322 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Sipa1l2Q80TE4 1722 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm21663A0A0G2JE01 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm7361D3Z6R1 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 5031410I06RikE9Q4E0 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm1979E9QAN3 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm5862K7N5V5 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm10220K7N660 267 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Mre11Q61216 706 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Smarca5Q91ZW3 1051 aaKnown RBP11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 AcrbpQ3V140 540 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Aldh8a1Q8BH00 487 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Ppp1r42Q8R1Z4 357 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 FanclQ9CR14 375 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cnksr1A2A9K7 700 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Tceal9Q9DD24 104 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Slit2Q9R1B9 1521 aa11.78□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 GckrQ91X44 587 aa11.77□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Pdzd9Q9D9M4 266 aa11.77□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Gm21680A0A0G2JGR8 267 aa11.77□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Ptpn23Q6PB44 1692 aa11.77□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Hsp90b1P08113 802 aaKnown RBP11.77□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Nkx1-2P42580 305 aa11.77□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Tbc1d32Q3URV1 1296 aa11.77□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Txnrd1Q9JMH6 613 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Taf7Q9R1C0 341 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 ScaperF8VQ70 1398 aaKnown RBP11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Znf692Q3U381 531 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Tnpo1Q8BFY9 898 aaKnown RBP11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Phkg2Q9DB30 406 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Simc1E9Q6E9 1354 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Unc13bQ9Z1N9 1602 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Htatsf1Q8BGC0 757 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Cyp2d12Q8BVD2 504 aa11.76□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Dnttip2Q8R2M2 758 aaKnown RBP11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Nid2O88322 1403 aa11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Map3k13Q1HKZ5 959 aa11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Slc5a1Q8C3K6 665 aa11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Disp3A3KFU9 1347 aa11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Sptbn5F6UCX4 1208 aa11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Ppp1r9bQ6R891 817 aaKnown RBP11.75□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Arhgef1Q61210 920 aaKnown RBP11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Q9D2X8 372 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Scn7aB1AYL1 1681 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Atp8b2P98199 1209 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 DekQ7TNV0 380 aaKnown RBP11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Ddx54Q8K4L0 874 aaKnown RBP11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Thsd7aQ69ZU6 1645 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Aox2Q5SGK3 1345 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Zap70P43404 618 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Brinp3Q499E0 766 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Col15a1O35206 1367 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Zkscan2G3X952 960 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 CoilQ5SU73 570 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Map3k2Q61083 619 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Irf9Q61179 399 aa11.74□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Eif3aP23116 1344 aaKnown RBP11.73□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 RgmbQ7TQ33 436 aa11.73□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Col1a2Q01149 1372 aa11.73□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Tbc1d9Q3UYK3 1264 aa11.73□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Nfat5Q9WV30 1534 aa11.73□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Hmox1P14901 289 aa11.72□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Stk36Q69ZM6 1316 aa11.72□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Flad1Q8R123 492 aa11.72□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 4933402E13RikQ9D4D2 429 aa11.72□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Gimap5Q8BWF2 308 aa11.72□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 SympkQ80X82 1284 aa11.71□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Phlpp1Q8CHE4 1687 aa11.71□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Asic4Q7TNS7 539 aa11.71□□□□□ -0.53
Sh3rf1-202ENSMUST00000209611 Ipo4Q8VI75 1082 aa11.71□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Atg3Q9CPX6 314 aa11.71□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 MccE9PWI3 1003 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Hoxa7P02830 229 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Ptpdc1Q6NZK8 747 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Bcar3Q9QZK2 820 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Msh6P54276 1358 aaKnown RBP11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Tmem119Q8R138 280 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Zeb2Q9R0G7 1215 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 Pde3bQ61409 1100 aa11.7□□□□□ -0.54
Sh3rf1-202ENSMUST00000209611 CenppQ9CZ92 286 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms