RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 1700019A02RikA0A087WPV9 146 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Mum1Q6DID5 682 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 E4f1Q8CCE9 783 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 EvcP57680 1005 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Sv2bQ8BG39 683 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Tnnt2P50752 301 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Bach2P97303 839 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Grpel1Q99LP6 217 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 PtpruB1AUH1 1446 aa13.06□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Hmox1P14901 289 aa13.05□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ints3Q7TPD0 1041 aaKnown RBP13.05□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Utp18Q5SSI6 552 aaKnown RBP13.05□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Eif4a2P10630 407 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ccar2Q8VDP4 922 aaKnown RBP13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ccdc94Q9D6J3 314 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Kif13aQ9EQW7 1749 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Med4Q9CQA5 270 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Mmp8O70138 465 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Srgap3Q812A2 1099 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Cul9Q80TT8 1865 aa13.04□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Plin1Q8CGN5 517 aa13.03□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ppp1r42Q8R1Z4 357 aa13.03□□□□□ -0.32
Rnf40-206ENSMUST00000206914 CatipB9EKE5 520 aa13.03□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Atp8b2P98199 1209 aa13.03□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Wdr93Q402B2 695 aa13.03□□□□□ -0.32
Rnf40-206ENSMUST00000206914 MpripP97434 1024 aa13.02□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Ncbp1Q3UYV9 790 aaKnown RBP13.02□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Cpa2Q504N0 417 aa13.02□□□□□ -0.32
Rnf40-206ENSMUST00000206914 TmpoQ61033 693 aaKnown RBP13.02□□□□□ -0.32
Rnf40-206ENSMUST00000206914 Stk36Q69ZM6 1316 aa13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Tpm3P21107 285 aaKnown RBP13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Adcy5P84309 1262 aa13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Pdzrn3Q69ZS0 1063 aa13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Prune1Q8BIW1 454 aa13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Adam1bQ8R534 806 aa13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Gemin5Q8BX17 1502 aaKnown RBP13.02□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ube2hP62257 183 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Chd4Q6PDQ2 1915 aaKnown RBP13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Klhl34A2AI76 644 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Fbxo2Q80UW2 297 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Gys2Q8VCB3 704 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Mcmdc2E9Q956 681 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Znf316Q6PGE4 1016 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Igsf1Q7TQA1 1317 aa13.01□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Gm973E9Q295 1059 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Zfp51Q3U4L8 781 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Jakmip1Q8BVL9 626 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Inpp5bQ8K337 993 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Astn2Q80Z10 1352 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Cspp1B2RX88 1205 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Cc2d1aQ8K1A6 943 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 CalcaP70160 136 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ggnbp2Q5SV77 696 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Irx4Q9QY61 515 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Pmfbp1Q9WVQ0 1022 aa13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Zc3h13E9Q784 1729 aaKnown RBP13□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Yeats2Q3TUF7 1407 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Itsn1Q9Z0R4 1714 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Pibf1E9Q6K3 756 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ptgs1P22437 602 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ms4a2P20490 235 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Mx2Q9WVP9 655 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Cavin1O54724 392 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Nucb2P81117 420 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ccdc162pQ0VG85 912 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Ccdc178Q8CDV0 866 aa12.99□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Elmsan1E9Q2I4 1089 aaKnown RBP12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Zfp91Q62511 572 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 PdcQ9QW08 244 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Tshz3Q8CGV9 1081 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Chmp4cQ9D7F7 232 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Slx4ipQ9D7Y9 413 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Dip2aQ8BWT5 1523 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Brpf1B2RRD7 1212 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Pcmtd1P59913 357 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Stx6Q9JKK1 255 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Tet3Q8BG87 1668 aa12.98□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Med1Q925J9 1575 aa12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Smc3Q9CW03 1217 aaKnown RBP12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Rad50P70388 1312 aa12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Cwc27Q3TKY6 469 aa12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Q3TQI7 289 aaKnown RBP12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Kiaa0753Q6A000 959 aa12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Zscan22Q8BGS5 496 aa12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Utp3Q9JI13 469 aaKnown RBP12.97□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Zfp251Q6PCX8 632 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Samm50Q8BGH2 469 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Slit2Q9R1B9 1521 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 FancaQ9JL70 1439 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 PzpQ61838 1495 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Cchcr1Q8K2I2 770 aa12.96□□□□□ -0.33
Rnf40-206ENSMUST00000206914 Tpx2A2APB8 745 aaKnown RBP12.96□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Ccne1Q61457 408 aa12.96□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Ercc6l2Q9JIM3 1537 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Cfap73J3QPZ5 306 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Gjb2Q00977 226 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Sf3a1Q8K4Z5 791 aaKnown RBP12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Tnrc6bQ8BKI2 1810 aaKnown RBP12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Nphp3Q7TNH6 1325 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Msh6P54276 1358 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms