RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Strn4P58404 760 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Adamts7Q68SA9 1657 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Gm45015A0A140LII9 184 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Gm18336A0A140LIU8 765 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Snap23O09044 210 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Chpf2Q3UU43 768 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Sf3a1Q8K4Z5 791 aaKnown RBP9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 MsnP26041 577 aaKnown RBP9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ddx19aQ61655 478 aaKnown RBP9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Olfml1Q8BSH2 233 aa9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Noc3lQ8VI84 807 aaKnown RBP9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Utp3Q9JI13 469 aaKnown RBP9.93□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Mcmdc2E9Q956 681 aa9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Mmp8O70138 465 aa9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Eya1P97767 591 aa9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Mphosph10Q810V0 681 aaKnown RBP9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Cchcr1Q8K2I2 770 aa9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Rbm27Q5SFM8 1060 aaKnown RBP9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ythdc1E9Q5K9 736 aaKnown RBP9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Dhx16G3X8X0 1044 aaKnown RBP9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Prune1Q8BIW1 454 aa9.92□□□□□ -0.82
Bdnf-208ENSMUST00000111049 PtpruB1AUH1 1446 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Cct4P80315 539 aaKnown RBP9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Usp48Q3V0C5 1052 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Scaf1Q5U4C3 1256 aaKnown RBP9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Pof1bQ8K4L4 587 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ift172Q6VH22 1749 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Exoc6bA6H5Z3 810 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Fkbp4P30416 458 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Gjb2Q00977 226 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Clcn1Q64347 994 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Ddx11Q6AXC6 880 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Nap1l3Q794H2 544 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Top1mtQ8R4U6 593 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Mad1l1Q9WTX8 717 aaKnown RBP9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Arhgef28P97433 1693 aa9.91□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Fam184aE9PW83 1143 aa9.9□□□□□ -0.82
Bdnf-208ENSMUST00000111049 TatQ8QZR1 454 aa9.9□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Q9D9S1 216 aa9.9□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Slx4ipQ9D7Y9 413 aa9.9□□□□□ -0.82
Bdnf-208ENSMUST00000111049 Cspp1B2RX88 1205 aa9.9□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Map3k13Q1HKZ5 959 aa9.9□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Nol11Q8BJW5 723 aaKnown RBP9.9□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Iffo2Q8R2V2 512 aa9.9□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Adam1bQ8R534 806 aa9.9□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Znf326O88291 580 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Bcl2l13P59017 434 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Babam1Q3UI43 333 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Stk36Q69ZM6 1316 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Lmod3E9QA62 571 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Vwa3bJ9JI28 736 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Brf1Q8CFK2 676 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Znf335A2A5K6 1337 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Qser1A2BIE1 1698 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Tpx2A2APB8 745 aaKnown RBP9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gm973E9Q295 1059 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 EzrP26040 586 aaKnown RBP9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Dnajc5P60904 198 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gse1Q3U3C9 1213 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 PsapQ61207 557 aaKnown RBP9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Kdm4aQ8BW72 1064 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 AdgbG3UZ78 1657 aa9.89□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Pdzrn3Q69ZS0 1063 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Med4Q9CQA5 270 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Frmpd2A0A140LI67 1392 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Samm50Q8BGH2 469 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Sirt1Q923E4 737 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gm9992B2RWK3 458 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gm10563F6WIE4 79 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Unc93aQ710D3 458 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Usp32F8VPZ3 1604 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Abca14E9Q8F8 1683 aa9.88□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Zap70P43404 618 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Rnf20Q5DTM8 973 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Utp18Q5SSI6 552 aaKnown RBP9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 R3hcc1Q8BSI6 488 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Chd1lQ9CXF7 900 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Stx6Q9JKK1 255 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Sh3bp5Q9Z131 463 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 NcapgE9PWG6 1004 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Fyb1O35601 819 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ier5O89113 308 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Zdhhc9P59268 364 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Rassf8Q8CJ96 419 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Nlgn1Q99K10 843 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 PdcQ9QW08 244 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Tmem132eQ6IEE6 982 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 NaspQ99MD9 773 aaKnown RBP9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Pmfbp1Q9WVQ0 1022 aa9.87□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Foxp4Q9DBY0 795 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Pes1Q9EQ61 584 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gemin5Q8BX17 1502 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 MyclP10166 368 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 RdxP26043 583 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Kif3aP28741 701 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gpatch11Q3UFS4 262 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 CltcQ68FD5 1675 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 PzpQ61838 1495 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Igsf1Q7TQA1 1317 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Pank2Q3U4S0 443 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms