RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Kndc1Q0KK55 1742 aa10.63□□□□□ -0.71
Clcn3-205ENSMUST00000110302 SkilQ60665 675 aa10.63□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Trim27Q62158 513 aa10.63□□□□□ -0.71
Clcn3-205ENSMUST00000110302 1700019A02RikA0A087WPV9 146 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Brd1E9PZ26 1189 aaKnown RBP10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Aplp1Q03157 653 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Pdia6Q922R8 440 aaKnown RBP10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Shank2Q80Z38 1476 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Q3TQI7 289 aaKnown RBP10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Morc2aQ69ZX6 1030 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 4930572O03RikQ8C5Y0 211 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Dbr1Q923B1 550 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Stk36Q69ZM6 1316 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Ank1Q02357 1862 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Adcy9P51830 1353 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Iqsec3Q3TES0 1195 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Znf526Q8BI66 675 aa10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Ybx3Q9JKB3 361 aaKnown RBP10.62□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Zranb3Q6NZP1 1069 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Atg3Q9CPX6 314 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Cacna1sQ02789 1880 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 HdgfP51859 237 aaKnown RBP10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Asic4Q7TNS7 539 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Aldh8a1Q8BH00 487 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Col4a1P02463 1669 aa10.61□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Abca3Q8R420 1704 aa10.6□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Pnmal2G3X9N3 661 aa10.6□□□□□ -0.71
Clcn3-205ENSMUST00000110302 GckrQ91X44 587 aa10.6□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Taf7Q9R1C0 341 aa10.6□□□□□ -0.71
Clcn3-205ENSMUST00000110302 ScaperF8VQ70 1398 aaKnown RBP10.6□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Nav1Q8CH77 1875 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Nwd2Q6P5U7 1742 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Prkar2bP31324 416 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Echdc1Q9D9V3 322 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Rangap1P46061 589 aaKnown RBP10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Gimap5Q8BWF2 308 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Cluap1Q8R3P7 413 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Fam13aQ8BGI4 693 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Cc2d1aQ8K1A6 943 aa10.59□□□□□ -0.71
Clcn3-205ENSMUST00000110302 Tnrc6cQ3UHC0 1690 aaKnown RBP10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Eif3bQ8JZQ9 803 aaKnown RBP10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Cetn4Q8K4K1 168 aa10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Arap2Q8BZ05 1703 aa10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ccdc183A2AJB1 534 aa10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 PsapQ61207 557 aaKnown RBP10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Larp1Q6ZQ58 1072 aaKnown RBP10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Smim5Q8BT42 78 aa10.58□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Zpr1Q62384 459 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Bend3Q6PAL0 825 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Chmp7Q8R1T1 451 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Armcx1Q9CX83 456 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Bcl2l12Q9D3J3 255 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 CarsQ9ER72 831 aaKnown RBP10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Fam50bQ9WTJ8 334 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Crb1Q8VHS2 1405 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Mst1rQ62190 1378 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ccdc155Q80VJ8 648 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ipo9Q91YE6 1041 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 SympkQ80X82 1284 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 HnrnpuQ8VEK3 800 aaKnown RBP10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Acsbg1Q99PU5 721 aa10.57□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Kcnh4A2A5F7 1018 aa10.56□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Kif18aQ91WD7 886 aa10.56□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Lrrc59Q922Q8 307 aaKnown RBP10.56□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Nkx1-2P42580 305 aa10.56□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ints5Q8CHT3 1018 aa10.56□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Myt1Q8CFC2 1127 aa10.55□□□□□ -0.72
Clcn3-205ENSMUST00000110302 HellsQ60848 821 aa10.55□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Gnai2P08752 355 aaKnown RBP10.55□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Tbc1d32Q3URV1 1296 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Triml2E9PW10 424 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Map7O88735 730 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Cgnl1Q6AW69 1298 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ppm1mQ8BU27 406 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ak7Q9D2H2 614 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Gcc1Q9D4H2 778 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 AceP09470 1312 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Wdr63B2RY71 923 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Fkbp4P30416 458 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Atp8b2P98199 1209 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Slc5a1Q8C3K6 665 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Mrc1Q61830 1456 aa10.54□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Igfbp6P47880 238 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Ipo8Q7TMY7 1010 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Col22a1E9Q7P1 1613 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Rtl5Q5DTT4 599 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Speer4bQ9D9F7 267 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Mmp8O70138 465 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Tnnt1O88346 262 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Zeb2Q9R0G7 1215 aa10.53□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Mcm2P97310 904 aa10.52□□□□□ -0.72
Clcn3-205ENSMUST00000110302 Atg4a-psA0A0G2JFS9 396 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Irf9Q61179 399 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Eif4g2Q62448 906 aaKnown RBP10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Atg4aQ8C9S8 396 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 FanclQ9CR14 375 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Erbb4Q61527 1308 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Greb1lB9EJV3 1913 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 Nhsl1Q8CAF4 1587 aa10.52□□□□□ -0.73
Clcn3-205ENSMUST00000110302 PigbQ9JJQ0 542 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms