RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Trim27Q62158 513 aa13.9□□□□□ -0.18
Ebf3-202ENSMUST00000106118 Gcc1Q9D4H2 778 aa13.9□□□□□ -0.18
Ebf3-202ENSMUST00000106118 CarsQ9ER72 831 aaKnown RBP13.9□□□□□ -0.18
Ebf3-202ENSMUST00000106118 Cnksr1A2A9K7 700 aa13.9□□□□□ -0.18
Ebf3-202ENSMUST00000106118 Brd1E9PZ26 1189 aaKnown RBP13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Prkar2bP31324 416 aa13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Tm6sf1P58749 370 aa13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 ThemisQ8BGW0 636 aa13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Gnai2P08752 355 aaKnown RBP13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Ddx17Q501J6 650 aaKnown RBP13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Fam83gQ5SWY7 812 aa13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Msh6P54276 1358 aaKnown RBP13.89□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Aox2Q5SGK3 1345 aa13.88□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Eif4a1P60843 406 aaKnown RBP13.88□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Col15a1O35206 1367 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Aplp1Q03157 653 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Aldh8a1Q8BH00 487 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Brinp3Q499E0 766 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Zpr1Q62384 459 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Htatsf1Q8BGC0 757 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Tet3Q8BG87 1668 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Hoxa7P02830 229 aa13.87□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Fam13aQ8BGI4 693 aa13.86□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Eif2s2Q99L45 331 aaKnown RBP13.86□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Cc2d1aQ8K1A6 943 aa13.86□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Eif3bQ8JZQ9 803 aaKnown RBP13.86□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Echdc1Q9D9V3 322 aa13.86□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Col1a2Q01149 1372 aa13.85□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Fkbp4P30416 458 aa13.85□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Cog6Q8R3I3 657 aa13.85□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Phkg2Q9DB30 406 aa13.85□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Mfap1aC0HKD8 439 aaKnown RBP13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Mfap1bC0HKD9 439 aaKnown RBP13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Rabep1O35551 862 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Pdzd9Q9D9M4 266 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Atp10bB1AWN4 1474 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Ltbp4Q8K4G1 1666 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Tbc1d32Q3URV1 1296 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 CoilQ5SU73 570 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Ipo4Q8VI75 1082 aa13.84□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Disp3A3KFU9 1347 aa13.83□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Stk36Q69ZM6 1316 aa13.83□□□□□ -0.19
Ebf3-202ENSMUST00000106118 Ccdc146E9Q9F7 977 aa13.83□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Wdr63B2RY71 923 aa13.83□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Cyp2d12Q8BVD2 504 aa13.83□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Nkx1-2P42580 305 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Tmem119Q8R138 280 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 TefQ9JLC6 301 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Taf7Q9R1C0 341 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Myo5bP21271 1818 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Bcl9lQ67FY2 1494 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 SlkO54988 1233 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Phf23Q8BSN5 401 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Atg3Q9CPX6 314 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Nphp1Q9QY53 687 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 GckrQ91X44 587 aa13.82□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Amigo3Q8C2S7 508 aa13.81□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Fam50bQ9WTJ8 334 aa13.81□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gli3Q61602 1583 aa13.81□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Morc2aQ69ZX6 1030 aa13.81□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Eif3aP23116 1344 aaKnown RBP13.81□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Ccdc155Q80VJ8 648 aa13.8□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Slit1Q80TR4 1531 aa13.8□□□□□ -0.2
Ebf3-202ENSMUST00000106118 RgmbQ7TQ33 436 aa13.8□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Cyb5rlB1AS42 316 aa13.8□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Srgap3Q812A2 1099 aa13.8□□□□□ -0.2
Ebf3-202ENSMUST00000106118 PtmaP26350 111 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Atp8b2P98199 1209 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Mre11Q61216 706 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Erich6bQ9D4S6 220 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Speer4bQ9D9F7 267 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Cyp46a1Q9WVK8 500 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Pnpla7A2AJ88 1352 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Pnmal2G3X9N3 661 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Ppp1r42Q8R1Z4 357 aa13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Ppp1r9bQ6R891 817 aaKnown RBP13.79□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Cfdp1O88271 295 aaKnown RBP13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Arhgef1Q61210 920 aaKnown RBP13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Ssfa2Q922B9 1252 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 FanclQ9CR14 375 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Txnrd1Q9JMH6 613 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Mphosph10Q810V0 681 aaKnown RBP13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Tceal9Q9DD24 104 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gm21663A0A0G2JE01 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gm7361D3Z6R1 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 5031410I06RikE9Q4E0 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gm1979E9QAN3 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gm5862K7N5V5 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Gm10220K7N660 267 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Bcl2l13P59017 434 aa13.78□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Slc5a1Q8C3K6 665 aa13.77□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Nek4Q9Z1J2 792 aa13.77□□□□□ -0.2
Ebf3-202ENSMUST00000106118 Cwc27Q3TKY6 469 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Irf9Q61179 399 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Cdhr2E9Q7P9 1308 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Cnnm1Q0GA42 951 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Slx1bQ8BX32 270 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Zeb2Q9R0G7 1215 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Dlg5E9Q9R9 1921 aa13.77□□□□□ -0.21
Ebf3-202ENSMUST00000106118 Gm21680A0A0G2JGR8 267 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms