RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Znf18Q810A1 556 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cfap74Q3UY96 1578 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Irgm2A0A140LIF8 407 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ankrd13dQ6PD24 605 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Iqca1Q9CUL5 857 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ccdc181Q80ZU5 509 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cep57l1Q8VDS7 400 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cul5Q9D5V5 780 aa10.52□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Arhgef5E9Q7D5 1581 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Dhx9O70133 1380 aaKnown RBP10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Slf2Q6P9P0 1278 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Med4Q9CQA5 270 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Lamb3Q61087 1168 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Mctp1E9PV86 951 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Frat2Q8K025 231 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 CastP51125 788 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 GpkowQ56A08 488 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Phf14Q9D4H9 881 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 TnikP83510 1323 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Trim30cD3YVI9 513 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ppp1r15aP17564 657 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Znf697Q569E7 569 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ddx58Q6Q899 926 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Pmfbp1Q9WVQ0 1022 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cfap58B2RW38 873 aa10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cct4P80315 539 aaKnown RBP10.51□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ttc21bQ0HA38 1315 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ifit1bl2Q3U687 466 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Slc26a8Q8R0C3 999 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 MvpQ9EQK5 861 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Sos1Q62245 1319 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 NapbP28663 298 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Rbm26Q6NZN0 1012 aaKnown RBP10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ppp6r1Q7TSI3 856 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Dnaaf4Q8R368 420 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Rnf216P58283 853 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Nup88Q8CEC0 753 aaKnown RBP10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ces1aE9PYP1 563 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Frmd3Q8BHD4 595 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Epb41l3Q9WV92 929 aa10.5□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ptpdc1Q6NZK8 747 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Arhgef18Q6P9R4 1021 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Pla2r1Q62028 1487 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ces1hD3Z298 562 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Pafah1b1P63005 410 aaKnown RBP10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Samm50Q8BGH2 469 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Emilin2Q8K482 1074 aa10.49□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Jakmip2D3YXK0 820 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ccdc155Q80VJ8 648 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Brf1Q8CFK2 676 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Zfp444Q3TDV8 331 aaKnown RBP10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Otud6bQ8K2H2 294 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 BbxQ8VBW5 907 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ccne1Q61457 408 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Secisbp2lQ6A098 1086 aaKnown RBP10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Slu7Q8BHJ9 585 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cog6Q8R3I3 657 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 St5Q924W7 1134 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Fam184aE9PW83 1143 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Smarcc1P97496 1104 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cdan1Q8CC12 1239 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 CarsQ9ER72 831 aaKnown RBP10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Myo1bP46735 1107 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 MicalclQ9D5U9 680 aa10.48□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Armc3A2AU72 881 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cetn1P41209 172 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cacna2d4Q5RJF7 1116 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cep55Q8BT07 462 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Slc14a2Q8R4T9 930 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Paxip1Q6NZQ4 1056 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Kif18aQ91WD7 886 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Gigyf1Q99MR1 1044 aaKnown RBP10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Spag5Q7TME2 1165 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ccdc83Q9D4V3 305 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Rbm27Q5SFM8 1060 aaKnown RBP10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cetn2Q9R1K9 172 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Rapgef3Q8VCC8 918 aa10.47□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Gnl2Q99LH1 728 aaKnown RBP10.46□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 NsmfQ99NF2 532 aa10.46□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Noc2lQ9WV70 747 aaKnown RBP10.46□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Ltv1Q6NSQ7 470 aaKnown RBP10.46□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Matr3Q8K310 846 aaKnown RBP10.46□□□□□ -0.73
Snrnp200-201ENSMUST00000103220 Cavin1O54724 392 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Rnf41Q8BH75 317 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Kdm5bQ80Y84 1544 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Myd88P22366 296 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Arhgef11Q68FM7 1552 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Arglu1Q3UL36 271 aaKnown RBP10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 InsrP15208 1372 aa10.46□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Ift74Q8BKE9 600 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Ppp1r21Q3TDD9 780 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Tsg101Q61187 391 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Cyp7a1Q64505 503 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Nphp3Q7TNH6 1325 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Soga3Q6NZL0 945 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Arap1Q4LDD4 1452 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Sptbn5F6UCX4 1208 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Traf3ip1Q149C2 625 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Sh3d21Q7TSG5 549 aa10.45□□□□□ -0.74
Snrnp200-201ENSMUST00000103220 Ift57Q8BXG3 429 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms