RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Larp1Q6ZQ58 1072 aaKnown RBP11.77□□□□□ -0.53
Scn8a-202ENSMUST00000096198 ApobrQ8VBT6 942 aa11.77□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Gpr37l1Q99JG2 481 aa11.77□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Trpm3Q5F4S9 1721 aa11.77□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Cntnap3E9PY62 1287 aa11.76□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Ppargc1bQ8VHJ7 1014 aa11.76□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Syngap1F6SEU4 1340 aa11.76□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Col15a1O35206 1367 aa11.76□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Adgrb1Q3UHD1 1582 aa11.75□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Usp48Q3V0C5 1052 aa11.75□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Rbm26Q6NZN0 1012 aaKnown RBP11.75□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Speer4bQ9D9F7 267 aa11.75□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Llgl2Q3TJ91 1027 aa11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Sp8Q8BMJ8 486 aa11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Usp40Q8BWR4 1235 aa11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Q8C6G1 249 aa11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Arih1Q9Z1K5 555 aa11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 AfdnQ9QZQ1 1820 aaKnown RBP11.74□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Kif16bB1AVY7 1312 aa11.73□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Lrch3Q8BVU0 778 aa11.73□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Glis2Q8VDL9 521 aa11.73□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Gm10471E9Q1C7 252 aa11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Lmnb1P14733 588 aaKnown RBP11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Smarcc1P97496 1104 aa11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Ccnl1Q52KE7 532 aaKnown RBP11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 PrimpolQ6P1E7 537 aa11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Tango6Q8C3S2 1079 aa11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Cd248Q91V98 765 aa11.72□□□□□ -0.53
Scn8a-202ENSMUST00000096198 Cypt3B1AY64 174 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 D830030K20RikE9PYQ5 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm3043K7N693 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm16440K7N6G6 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm2244L7N2A3 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm3278L7N2D2 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm8271L7N2E2 218 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Pou3f3P31361 497 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Foxn1Q61575 648 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Zfp831A2ADM8 1628 aa11.7□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Mphosph9A6H5Y1 991 aa11.69□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gsto1O09131 240 aa11.69□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Miga2Q8BK03 593 aa11.69□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Champ1Q8K327 802 aaKnown RBP11.69□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Evi5P97366 809 aa11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Pla2g5P97391 137 aa11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gja5Q01231 358 aa11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Zbtb4Q5F293 982 aa11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Unc5clQ6R653 518 aa11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Chd4Q6PDQ2 1915 aaKnown RBP11.68□□□□□ -0.54
Scn8a-202ENSMUST00000096198 NcanP55066 1268 aa11.67□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Slfnl1Q8BHW9 410 aa11.67□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Cdk12Q14AX6 1484 aaKnown RBP11.67□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Ubr1O70481 1757 aa11.67□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Srp68Q8BMA6 625 aaKnown RBP11.66□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Tktl2Q9D4D4 627 aa11.66□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Msh6P54276 1358 aaKnown RBP11.66□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Pappa2E9PZ87 1789 aa11.65□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Prpmp5E9PXN1 296 aa11.65□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Ptcd1Q8C2E4 695 aaKnown RBP11.65□□□□□ -0.54
Scn8a-202ENSMUST00000096198 RtcbQ99LF4 505 aaKnown RBP11.65□□□□□ -0.54
Scn8a-202ENSMUST00000096198 Gm16486A0A1D5RMD1 1434 aa11.64□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Pkd2O35245 966 aa11.64□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Hdac5Q9Z2V6 1113 aa11.64□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Dcdc2bF7BCK0 340 aa11.63□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Smim22J3QP37 91 aa11.63□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Ep400Q8CHI8 3072 aaKnown RBP11.63□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Col5a2Q3U962 1497 aa11.63□□□□□ -0.55
Scn8a-202ENSMUST00000096198 AceP09470 1312 aa11.62□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Pdzrn4E9PUZ9 1014 aa11.62□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Rgl3Q3UYI5 709 aa11.62□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Syt17Q920M7 470 aa11.62□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Ubxn2aQ99KJ0 258 aa11.62□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Piezo1E2JF22 2547 aa11.61□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Brpf1B2RRD7 1212 aa11.61□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Map2k1P31938 393 aa11.61□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Scaf8Q6DID3 1268 aa11.61□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Amhr2Q8K592 568 aa11.61□□□□□ -0.55
Scn8a-202ENSMUST00000096198 TkfcQ8VC30 578 aa11.6□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Hs6st3Q9QYK4 470 aa11.6□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Hdac6Q9Z2V5 1149 aa11.6□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Mtcl1Q3UHU5 1945 aa11.6□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Znf335A2A5K6 1337 aa11.6□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Exosc9Q9JHI7 438 aaKnown RBP11.59□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Tjp1P39447 1745 aaKnown RBP11.59□□□□□ -0.55
Scn8a-202ENSMUST00000096198 Mical3Q8CJ19 1993 aa11.58□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Gm42688A0A0R3P9D1 673 aa11.58□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Ppp4r2Q0VGB7 417 aa11.58□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Ccdc142Q8CAI1 738 aa11.58□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Scn7aB1AYL1 1681 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Ldlrad1D3YYZ1 218 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Cnga1P29974 684 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 LtbrP50284 415 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Aplp2Q06335 707 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Fxr1Q61584 677 aaKnown RBP11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Ano8Q6PB70 1060 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Pdzph1Q8BGR1 1238 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Rassf10Q8BL43 508 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 HttP42859 3119 aa11.57□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Scn9aQ62205 1984 aa11.56□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Myo15bI7HPW8 3033 aa11.56□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Zmynd8A2A484 1235 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms